Current Data Release Summary
Project Data Release Summary
This list represents the current status of all vertebrate genomes that the Ó³»´«Ã½ has released in recent years. Unless otherwise stated, genome builds were sequenced at the Ó³»´«Ã½. (NOTE: For the exact builds used in the 29 Mammals Project, see here.)
ALL genomes were assembled at the Ó³»´«Ã½. For all genomes, links are provided to a project page, the assembly files and NCBI's record for the latest build. When applicable, links are also provided for Ensembl (for gene annotation) and UCSC (for data visualization.)
Deep Coverage Mammalian Genome Projects
| Organism | Assembly Status | Genbank Accession | Ensembl Annotation | UCSC Browser | Notes |
|---|---|---|---|---|---|
|
African savannah elephant Loxodonta africana |
Complete | 7x coverage, anchoring in progress | |||
|
Dog Canis Familaiaris |
Complete | 7x coverage, anchored | |||
|
European rabbit Oryctolagus cuniculus |
Complete | 7x coverage, anchored | |||
|
Guinea Pig Cavia porcellus |
Complete | 7x coverage | |||
|
Horse Equus caballus |
Complete | 7x coverage (no 2X exists) | |||
|
Little brown bat Myotis lucifugus |
Low coverage (2x) complete | Deep sequencing in progress |
Deep Coverage Non-Mammalian Genome Projects
Green Anole Lizard
Anolis carolinensis
| Complete |
2x coverage, scheduled for deep coverage Baylor |
||||
|
Lesser Hedgehog (Tenrec) Echinops telfari |
Complete | 2x coverage | |||
|
Common Shrew Sorex araneus |
Complete | 2x coverage | |||
|
European hedgehog Erinaceus europeaus |
Complete | 2x coverage | |||
|
Ground squirrel Spermophilis tridecemlineatus |
Complete | 2x coverage | |||
|
Bushbaby Otolemur garnetti |
Complete | 2x coverage | |||
|
Tree shrew Tupaia belangeri |
Complete |
2x coverage, scheduled for deep coverageWashU |
|||
|
Pika Ochotona princeps |
Complete | 2x coverage | |||
|
Mouse lemur Microcebus murinus |
Complete | 2x coverage | |||
|
Alpaca Vicugna pacos |
Complete | UCSC |
2x coverage, sequenced at WashU |
||
|
Rock Hyrax Procavia capensis |
Complete |
2x coverage, sequenced at Baylor |
|||
|
Megabat Pteropus vampyrus |
Complete |
2x coverage, sequenced at Baylor |
|||
|
Dolphin Tursiops truncatus |
Complete |
2x coverage, sequenced at Baylor |
|||
|
Tarsier Tarsier syrichta |
Complete |
2x coverage, sequenced at Baylor |
|||
|
Kangaroo Rat Dipodomys ordii |
Complete |
2x coverage, sequenced at Baylor |
|||
|
Two-toed sloth Choloepus hoffmanni |
Complete |
2x coverage, sequenced at WashU |
For more information on these projects, please contact us at vertebrategenomes@broadinstitute.org.
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