Defining and benchmarking open problems in single-cell analysis.

Research square
Authors
Abstract

With the growing number of single-cell analysis tools, benchmarks are increasingly important to guide analysis and method development. However, a lack of standardisation and extensibility in current benchmarks limits their usability, longevity, and relevance to the community. We present Open Problems, a living, extensible, community-guided benchmarking platform including 10 current single-cell tasks that we envision will raise standards for the selection, evaluation, and development of methods in single-cell analysis.

Year of Publication
2024
Journal
Research square
Date Published
04/2024
DOI
10.21203/rs.3.rs-4181617/v1
PubMed ID
38645152
Links