Smoking habit and long-term colorectal cancer incidence by exome-wide mutational and neoantigen loads: evidence based on the prospective cohort incident-tumour biobank method.

BMJ oncology
Authors
Keywords
Abstract

OBJECTIVE: To test the hypothesis that the association of smoking with long-term colorectal cancer incidence may be stronger for tumours with higher mutational and neoantigen loads.METHODS AND ANALYSIS: In the Nurses' Health Study (1980-2012) and the Health Professionals Follow-up Study (1986-2012), our novel prospective cohort incident-tumour biobank method (PCIBM) used 3053 incident colorectal carcinoma cases including 752 cases with whole-exome sequencing data. Using the multivariable duplication-method Cox regression model with the inverse probability weighting to adjust for the selection bias due to tissue availability, we assessed a differential association of cigarette smoking with colorectal carcinoma incidence by an exome-wide tumour mutational burden (e-TMB) or neoantigen load.RESULTS: The association of pack-years smoked with colorectal cancer incidence differed by e-TMB (P<0.001). Multivariable-adjusted HRs for e-TMB-high (≥10 mutations/megabase) tumours were 1.28 (95% CI 0.72 to 2.28) and 2.56 (95% CI 1.61 to 4.07) for 1-19 and ≥20 pack-years (vs 0 pack-years; P<0.001), respectively. In contrast, pack-years smoked were not associated with e-TMB-low tumour incidence (P=0.67). A similar differential association was observed for the neoantigen load (P=0.017). The differential association by e-TMB appeared consistent in the strata of CpG island methylator phenotype status, mutation or lymphocytic infiltrates.CONCLUSIONS: Smoking is more strongly associated with the long-term incidence of colorectal carcinoma harbouring higher mutational and neoantigen loads. Our PCIBM-based evidence supports the immunosuppressive effect of smoking and the potential of smoking cessation in improving antitumour immunity for cancer prevention and treatment.

Year of Publication
2025
Journal
BMJ oncology
Volume
4
Issue
1
Pages
e000787
Date Published
12/2025
ISSN
2752-7948
DOI
10.1136/bmjonc-2025-000787
PubMed ID
40519220
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