The GenePattern Notebook Environment.
Cell Syst
| Authors | |
| Abstract | Interactive analysis notebook environments promise to streamline genomics research through interleaving text, multimedia, and executable code into unified, sharable, reproducible "research narratives." However, current notebook systems require programming knowledge, limiting their wider adoption by the research community. We have developed the GenePattern Notebook environment (), to our knowledge the first system to integrate the dynamic capabilities of notebook systems with an investigator-focused, easy-to-use interface that provides access to hundreds of genomic tools without the need to write code. |
| Year of Publication | 2017
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| Journal | Cell Syst
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| Volume | 5
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| Issue | 2
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| Pages | 149-151.e1
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| Date Published | 2017 08 23
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| ISSN | 2405-4712
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| DOI | 10.1016/j.cels.2017.07.003
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| PubMed ID | 28822753
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| PubMed Central ID | PMC5572818
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| Links | |
| Grant list | R01 CA154480 / CA / NCI NIH HHS / United States
R01 GM074024 / GM / NIGMS NIH HHS / United States
U19 AI090023 / AI / NIAID NIH HHS / United States
U24 CA194107 / CA / NCI NIH HHS / United States
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