Large scale meta-analysis characterizes genetic architecture for common psoriasis associated variants.
| Authors | |
| Abstract | Psoriasis is a complex disease of skin with a prevalence of about 2%. We conducted the largest meta-analysis of genome-wide association studies (GWAS) for psoriasis to date, including data from eight different Caucasian cohorts, with a combined effective sample size >39,000 individuals. We identified 16 additional psoriasis susceptibility loci achieving genome-wide significance, increasing the number of identified loci to 63 for European-origin individuals. Functional analysis highlighted the roles of interferon signalling and the NFκB cascade, and we showed that the psoriasis signals are enriched in regulatory elements from different T cells (CD8 T-cells and CD4 T-cells including T0, T1 and T17). The identified loci explain ∼28% of the genetic heritability and generate a discriminatory genetic risk score (AUC=0.76 in our sample) that is significantly correlated with age at onset (p=2 × 10). This study provides a comprehensive layout for the genetic architecture of common variants for psoriasis. |
| Year of Publication | 2017
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| Journal | Nat Commun
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| Volume | 8
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| Pages | 15382
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| Date Published | 2017 May 24
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| ISSN | 2041-1723
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| DOI | 10.1038/ncomms15382
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| PubMed ID | 28537254
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| PubMed Central ID | PMC5458077
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| Links | |
| Grant list | K08 AR060802 / AR / NIAMS NIH HHS / United States
R01 AR042742 / AR / NIAMS NIH HHS / United States
R01 AR054966 / AR / NIAMS NIH HHS / United States
R01 AR050511 / AR / NIAMS NIH HHS / United States
R01 AR065183 / AR / NIAMS NIH HHS / United States
R01 AR063611 / AR / NIAMS NIH HHS / United States
Wellcome Trust / United Kingdom
R44 HG006981 / HG / NHGRI NIH HHS / United States
MR/L011808/1 / Medical Research Council / United Kingdom
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