Kaminski J, Gibson MK, Franzosa EA, Segata N, Dantas G, Huttenhower C. High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED. PLoS Comput Biol. 2015;11(12):e1004557. doi:10.1371/journal.pcbi.1004557
Pombert JF, Xu J, Smith DR, et al. Complete genome sequences from three genetically distinct strains reveal high intraspecies genetic diversity in the microsporidian Encephalitozoon cuniculi. Eukaryot Cell. 2013;12(4):503-11. doi:10.1128/EC.00312-12
Colgrove RC, Liu X, Griffiths A, et al. History and genomic sequence analysis of the herpes simplex virus 1 KOS and KOS1.1 sub-strains. Virology. 2016;487:215-21. doi:10.1016/j.virol.2015.09.026
Tucker G, Loh PR, MacLeod IM, et al. Two-Variance-Component Model Improves Genetic Prediction in Family Datasets. Am J Hum Genet. 2015;97(5):677-90. doi:10.1016/j.ajhg.2015.10.002
Carlton JM, Volkman SK, Uplekar S, et al. Population Genetics, Evolutionary Genomics, and Genome-Wide Studies of Malaria: A View Across the International Centers of Excellence for Malaria Research. Am J Trop Med Hyg. 2015;93(3 Suppl):87-98. doi:10.4269/ajtmh.15-0049
Pelleau S, Moss EL, Dhingra SK, et al. Adaptive evolution of malaria parasites in French Guiana: Reversal of chloroquine resistance by acquisition of a mutation in pfcrt. Proc Natl Acad Sci U S A. 2015;112(37):11672-7. doi:10.1073/pnas.1507142112