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Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.

Meadows JRS, Kidd JM, Wang GD, et al. Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome biology. 2023;24(1):187. doi:10.1186/s13059-023-03023-7

A comprehensive genomic study of 390 H3F3A-mutant pediatric and adult diffuse high-grade gliomas, CNS WHO grade 4.

Williams EA, Brastianos PK, Wakimoto H, et al. A comprehensive genomic study of 390 H3F3A-mutant pediatric and adult diffuse high-grade gliomas, CNS WHO grade 4. Acta neuropathologica. 2023. doi:10.1007/s00401-023-02609-6

Advancing Understanding of Inequities in Rare Disease Genomics.

Serrano JG, O’Leary M, VanNoy GE, et al. Advancing Understanding of Inequities in Rare Disease Genomics. Clinical therapeutics. 2023. doi:10.1016/j.clinthera.2023.06.010

Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics.

Morse DB, Michalowski AM, Ceribelli M, et al. Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics. Cell systems. 2023;14(6):464-481.e7. doi:10.1016/j.cels.2023.05.003

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.

Lauterbur E, Cavassim MIA, Gladstein AL, et al. Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations. eLife. 2023;12. doi:10.7554/eLife.84874

Challenges and implications of genomics for T-cell lymphomas.

Jacobsen ED, Weinstock DM. Challenges and implications of genomics for T-cell lymphomas. Hematology Am Soc Hematol Educ Program. 2018;2018(1):63-68. doi:10.1182/asheducation-2018.1.63

Linking single-cell measurements of mass, growth rate, and gene expression.

Kimmerling RJ, Prakadan SM, Gupta AJ, et al. Linking single-cell measurements of mass, growth rate, and gene expression. Genome Biol. 2018;19(1):207. doi:10.1186/s13059-018-1576-0

Genomics of response to immune checkpoint therapies for cancer: implications for precision medicine.

Conway JR, Kofman E, Mo SS, Elmarakeby H, Van Allen E. Genomics of response to immune checkpoint therapies for cancer: implications for precision medicine. Genome Med. 2018;10(1):93. doi:10.1186/s13073-018-0605-7

Genome-wide discovery of epistatic loci affecting antibiotic resistance in Neisseria gonorrhoeae using evolutionary couplings.

Schubert B, Maddamsetti R, Nyman J, Farhat MR, Marks DS. Genome-wide discovery of epistatic loci affecting antibiotic resistance in Neisseria gonorrhoeae using evolutionary couplings. Nat Microbiol. 2019;4(2):328-338. doi:10.1038/s41564-018-0309-1

Pan-cancer integrative histology-genomic analysis via multimodal deep learning.

Chen RJ, Lu MY, Williamson DFK, et al. Pan-cancer integrative histology-genomic analysis via multimodal deep learning. Cancer Cell. 2022;40(8):865-878.e6. doi:10.1016/j.ccell.2022.07.004