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Bacterial Genomics Group

The "most wanted" taxa from the human microbiome for whole genome sequencing.

1.

Fodor AA, DeSantis TZ, Wylie KM, et al. The "most wanted" taxa from the human microbiome for whole genome sequencing. PLoS One. 2012;7(7):e41294. doi:10.1371/journal.pone.0041294.

Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus.

1.

Peleg AY, Miyakis S, Ward DV, et al. Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus. PLoS One. 2012;7(1):e28316. doi:10.1371/journal.pone.0028316.

Comparative genomics of enterococci: variation in Enterococcus faecalis, clade structure in E. faecium, and defining characteristics of E. gallinarum and E. casseliflavus.

1.

Palmer KL, Godfrey P, Griggs A, et al. Comparative genomics of enterococci: variation in Enterococcus faecalis, clade structure in E. faecium, and defining characteristics of E. gallinarum and E. casseliflavus. MBio. 2012;3(1):e00318-11. doi:10.1128/mBio.00318-11.

High quality draft genome sequence of Segniliparus rugosus CDC 945(T)= (ATCC BAA-974(T)).

1.

Earl AM, Desjardins CA, FitzGerald MG, et al. High quality draft genome sequence of Segniliparus rugosus CDC 945(T)= (ATCC BAA-974(T)). Stand Genomic Sci. 2011;5(3):389-97. doi:10.4056/sigs.2255041.

A catalog of reference genomes from the human microbiome.

1.

Human Microbiome Jumpstart Reference Strains Consortium, Nelson KE, Weinstock GM, et al. A catalog of reference genomes from the human microbiome. Science. 2010;328(5981):994-9. doi:10.1126/science.1183605.