Majumder B, Baraneedharan U, Thiyagarajan S, et al. Predicting clinical response to anticancer drugs using an ex vivo platform that captures tumour heterogeneity. Nat Commun. 2015;6:6169. doi:10.1038/ncomms7169
Palta P, Kaplinski L, Nagirnaja L, et al. Haplotype phasing and inheritance of copy number variants in nuclear families. PLoS One. 2015;10(4):e0122713. doi:10.1371/journal.pone.0122713
Rameseder J, Krismer K, Dayma Y, et al. A Multivariate Computational Method to Analyze High-Content RNAi Screening Data. J Biomol Screen. 2015;20(8):985-97. doi:10.1177/1087057115583037
Li H. BFC: correcting Illumina sequencing errors. Bioinformatics. 2015;31(17):2885-7. doi:10.1093/bioinformatics/btv290
Karr JR, Williams AH, Zucker JD, et al. Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models. PLoS Comput Biol. 2015;11(5):e1004096. doi:10.1371/journal.pcbi.1004096
Singer M, Pachter L. Controlling for conservation in genome-wide DNA methylation studies. BMC Genomics. 2015;16:420. doi:10.1186/s12864-015-1604-3
Zhang Y, Li L, Yang Y, Yang X, He S, Zhu Z. Light-weight reference-based compression of FASTQ data. BMC Bioinformatics. 2015;16:188. doi:10.1186/s12859-015-0628-7
Roqueiro D, Witteveen MJ, Anttila V, Terwindt GM, van den Maagdenberg AMJM, Borgwardt K. In silico phenotyping via co-training for improved phenotype prediction from genotype. Bioinformatics. 2015;31(12):i303-10. doi:10.1093/bioinformatics/btv254
Swamidass J, Calhoun BT, Bittker JA, Bodycombe NE, Clemons PA. Enhancing the rate of scaffold discovery with diversity-oriented prioritization. Bioinformatics. 2011;27(16):2271-8. doi:10.1093/bioinformatics/btr369
Swamidass J, Calhoun BT, Bittker JA, Bodycombe NE, Clemons PA. Utility-aware screening with clique-oriented prioritization. J Chem Inf Model. 2012;52(1):29-37. doi:10.1021/ci2003285