Konkel MK, Walker JA, Hotard AB, et al. Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project. Genome Biol Evol. 2015;7(9):2608-22. doi:10.1093/gbe/evv167
Farrer RA, Desjardins CA, Sakthikumar S, et al. Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii. MBio. 2015;6(5):e00868-15. doi:10.1128/mBio.00868-15
Thompson D, Regev A, Roy S. Comparative analysis of gene regulatory networks: from network reconstruction to evolution. Annu Rev Cell Dev Biol. 2015;31:399-428. doi:10.1146/annurev-cellbio-100913-012908
Landau DA, Tausch E, Taylor-Weiner AN, et al. Mutations driving CLL and their evolution in progression and relapse. Nature. 2015;526(7574):525-30. doi:10.1038/nature15395
Thompson DA. Comparative Transcriptomics in Yeasts. Methods Mol Biol. 2016;1361:67-76. doi:10.1007/978-1-4939-3079-1_4
Di Giallonardo F, Geoghegan JL, Docherty DE, et al. Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment. J Virol. 2015;90(2):862-72. doi:10.1128/JVI.02305-15
Mathee K, Narasimhan G, Valdes C, et al. Dynamics of Pseudomonas aeruginosa genome evolution. Proc Natl Acad Sci U S A. 2008;105(8):3100-5. doi:10.1073/pnas.0711982105
Orsi RH, Borowsky ML, Lauer P, et al. Short-term genome evolution of Listeria monocytogenes in a non-controlled environment. BMC Genomics. 2008;9:539. doi:10.1186/1471-2164-9-539
Lozovsky ER, Chookajorn T, Brown KM, et al. Stepwise acquisition of pyrimethamine resistance in the malaria parasite. Proc Natl Acad Sci U S A. 2009;106(29):12025-30. doi:10.1073/pnas.0905922106
Lebreton F, van Schaik W, McGuire AM, et al. Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains. MBio. 2013;4(4). doi:10.1128/mBio.00534-13