Thomas JC, Godfrey PA, Feldgarden M, Robinson A. Candidate targets of balancing selection in the genome of Staphylococcus aureus. Mol Biol Evol. 2012;29(4):1175-86. doi:10.1093/molbev/msr286
Dickinson BC, Packer MS, Badran AH, Liu DR. A system for the continuous directed evolution of proteases rapidly reveals drug-resistance mutations. Nat Commun. 2014;5:5352. doi:10.1038/ncomms6352
Garber M, Guttman M, Clamp M, Zody MC, Friedman N, Xie X. Identifying novel constrained elements by exploiting biased substitution patterns. Bioinformatics. 2009;25(12):i54-62. doi:10.1093/bioinformatics/btp190
Neafsey DE, Galagan JE. Dual modes of natural selection on upstream open reading frames. Mol Biol Evol. 2007;24(8):1744-51. doi:10.1093/molbev/msm093
Jaillon O, Aury JM, Brunet F, et al. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature. 2004;431(7011):946-57. doi:10.1038/nature03025
Bick AG, Calvo SE, Mootha VK. Evolutionary diversity of the mitochondrial calcium uniporter. Science. 2012;336(6083):886. doi:10.1126/science.1214977
Thompson DA, Roy S, Chan M, et al. Correction: Evolutionary principles of modular gene regulation in yeasts. Elife. 2013;2:e01114. doi:10.7554/eLife.01114
Bhatia G, Tandon A, Patterson N, et al. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. Am J Hum Genet. 2014;95(4):437-44. doi:10.1016/j.ajhg.2014.08.011
Kapheim KM, Pan H, Li C, et al. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living. Science. 2015;348(6239):1139-43. doi:10.1126/science.aaa4788
Lebreton F, van Schaik W, McGuire AM, et al. Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains. MBio. 2013;4(4). doi:10.1128/mBio.00534-13