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Publications

Selective gene dependencies in MYCN-amplified neuroblastoma include the core transcriptional regulatory circuitry.

Durbin AD, Zimmerman MW, Dharia NV, et al. Selective gene dependencies in MYCN-amplified neuroblastoma include the core transcriptional regulatory circuitry. Nat Genet. 2018;50(9):1240-1246. doi:10.1038/s41588-018-0191-z

Approximate, simultaneous comparison of microbial genome architectures via syntenic anchoring of quiver representations.

Salazar AN, Abeel T. Approximate, simultaneous comparison of microbial genome architectures via syntenic anchoring of quiver representations. Bioinformatics. 2018;34(17):i732-i742. doi:10.1093/bioinformatics/bty614

Dysbiosis of the gut microbiota and colorectal cancer: the key target of molecular pathological epidemiology.

Kosumi K, Mima K, Baba H, Ogino S. Dysbiosis of the gut microbiota and colorectal cancer: the key target of molecular pathological epidemiology. J Lab Precis Med. 2018;3. doi:10.21037/jlpm.2018.09.05

Mechanisms of acquired resistance to rapalogs in metastatic renal cell carcinoma.

Hamieh L, Choueiri TK, Ogórek B, et al. Mechanisms of acquired resistance to rapalogs in metastatic renal cell carcinoma. PLoS Genet. 2018;14(9):e1007679. doi:10.1371/journal.pgen.1007679

Cost Analyses of Genomic Sequencing: Lessons Learned from the MedSeq Project.

Christensen KD, Phillips KA, Green RC, Dukhovny D. Cost Analyses of Genomic Sequencing: Lessons Learned from the MedSeq Project. Value Health. 2018;21(9):1054-1061. doi:10.1016/j.jval.2018.06.013

Everolimus and pazopanib (E/P) benefit genomically selected patients with metastatic urothelial carcinoma.

Bellmunt J, Lalani AKA, Jacobus S, et al. Everolimus and pazopanib (E/P) benefit genomically selected patients with metastatic urothelial carcinoma. Br J Cancer. 2018;119(6):707-712. doi:10.1038/s41416-018-0261-0

Sex-Specific Association between Family History of Diabetes and Risk of Colorectal Cancer: Two Prospective Cohort Studies.

Ma W, Song M, Kværner AS, et al. Sex-Specific Association between Family History of Diabetes and Risk of Colorectal Cancer: Two Prospective Cohort Studies. Cancer Prev Res (Phila). 2018;11(9):535-544. doi:10.1158/1940-6207.CAPR-18-0159

Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling.

Perraki A, DeFalco TA, Derbyshire P, et al. Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling. Nature. 2018;561(7722):248-252. doi:10.1038/s41586-018-0471-x

Rare coding variant analysis in a large cohort of Ashkenazi Jewish families with inflammatory bowel disease.

Schiff ER, Frampton M, Ben-Yosef N, et al. Rare coding variant analysis in a large cohort of Ashkenazi Jewish families with inflammatory bowel disease. Hum Genet. 2018;137(9):723-734. doi:10.1007/s00439-018-1927-7

IL-1β inflammatory response driven by primary breast cancer prevents metastasis-initiating cell colonization.

Castaño Z, San Juan BP, Spiegel A, et al. IL-1β inflammatory response driven by primary breast cancer prevents metastasis-initiating cell colonization. Nat Cell Biol. 2018;20(9):1084-1097. doi:10.1038/s41556-018-0173-5