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Publications

Accessible, curated metagenomic data through ExperimentHub.

Pasolli E, Schiffer L, Manghi P, et al. Accessible, curated metagenomic data through ExperimentHub. Nat Methods. 2017;14(11):1023-1024. doi:10.1038/nmeth.4468

Should Identifying a Titin Truncating Variant Change the Management of Patients With Dilated Cardiomyopathy?

Newton-Cheh C. Should Identifying a Titin Truncating Variant Change the Management of Patients With Dilated Cardiomyopathy? J Am Coll Cardiol. 2017;70(18):2275-2277. doi:10.1016/j.jacc.2017.09.020

Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling.

Niepel M, Hafner M, Duan Q, et al. Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling. Nat Commun. 2017;8(1):1186. doi:10.1038/s41467-017-01383-w

Angiotensin II-derived constrained peptides with antiplasmodial activity and suppressed vasoconstriction.

Silva AF, Torres MDT, Silva LS, et al. Angiotensin II-derived constrained peptides with antiplasmodial activity and suppressed vasoconstriction. Sci Rep. 2017;7(1):14326. doi:10.1038/s41598-017-14642-z

Problematic alcohol use associates with sodium channel and clathrin linker 1 (SCLT1) in trauma-exposed populations.

Almli LM, Lori A, Meyers JL, et al. Problematic alcohol use associates with sodium channel and clathrin linker 1 (SCLT1) in trauma-exposed populations. Addict Biol. 2017. doi:10.1111/adb.12569

Plasma Metabolites From Choline Pathway and Risk of Cardiovascular Disease in the PREDIMED (Prevention With Mediterranean Diet) Study.

Guasch-Ferré M, Hu FB, Ruiz-Canela M, et al. Plasma Metabolites From Choline Pathway and Risk of Cardiovascular Disease in the PREDIMED (Prevention With Mediterranean Diet) Study. J Am Heart Assoc. 2017;6(11). doi:10.1161/JAHA.117.006524

Isoform-selective inhibitor of histone deacetylase 3 (HDAC3) limits pancreatic islet infiltration and protects female nonobese diabetic mice from diabetes.

Dirice E, Ng RWS, Martinez R, et al. Isoform-selective inhibitor of histone deacetylase 3 (HDAC3) limits pancreatic islet infiltration and protects female nonobese diabetic mice from diabetes. J Biol Chem. 2017;292(43):17598-17608. doi:10.1074/jbc.M117.804328

scDual-Seq: mapping the gene regulatory program of Salmonella infection by host and pathogen single-cell RNA-sequencing.

Avital G, Avraham R, Fan A, Hashimshony T, Hung DT, Yanai I. scDual-Seq: mapping the gene regulatory program of Salmonella infection by host and pathogen single-cell RNA-sequencing. Genome Biol. 2017;18(1):200. doi:10.1186/s13059-017-1340-x

Analysis commons, a team approach to discovery in a big-data environment for genetic epidemiology.

Brody JA, Morrison AC, Bis JC, et al. Analysis commons, a team approach to discovery in a big-data environment for genetic epidemiology. Nat Genet. 2017;49(11):1560-1563. doi:10.1038/ng.3968

Site-specific identification and quantitation of endogenous SUMO modifications under native conditions.

Lumpkin RJ, Gu H, Zhu Y, et al. Site-specific identification and quantitation of endogenous SUMO modifications under native conditions. Nat Commun. 2017;8(1):1171. doi:10.1038/s41467-017-01271-3