Publications

Integrating single-cell RNA-seq datasets with substantial batch effects.

Hrovatin K, Moinfar AA, Lapuerta AT, et al. Integrating single-cell RNA-seq datasets with substantial batch effects. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.11.03.565463

scX: A user-friendly tool for scRNA-seq exploration.

Waichman TV, Vercesi L, Berardino AA, et al. scX: A user-friendly tool for scRNA-seq exploration. ArXiv. 2023.

Single-cell transcriptomics stratifies organoid models of metabolic dysfunction-associated steatotic liver disease.

Hess A, Gentile SD, Ben Saad A, et al. Single-cell transcriptomics stratifies organoid models of metabolic dysfunction-associated steatotic liver disease. The EMBO journal. 2023;42(24):e113898. doi:10.15252/embj.2023113898

The molecular genetic landscape of human brain size variation.

Seidlitz J, Mallard TT, Vogel JW, et al. The molecular genetic landscape of human brain size variation. Cell reports. 2023;42(11):113439. doi:10.1016/j.celrep.2023.113439

Cross-ancestry analyses identify new genetic loci associated with 25-hydroxyvitamin D.

Wang X, Hivert V, Groot S, et al. Cross-ancestry analyses identify new genetic loci associated with 25-hydroxyvitamin D. PLoS genetics. 2023;19(11):e1011033. doi:10.1371/journal.pgen.1011033

Bi-allelic loss-of-function variants in WBP4, encoding a spliceosome protein, result in a variable neurodevelopmental syndrome.

Engal E, Oja KT, Maroofian R, et al. Bi-allelic loss-of-function variants in WBP4, encoding a spliceosome protein, result in a variable neurodevelopmental syndrome. American journal of human genetics. 2023;110(12):2112-2119. doi:10.1016/j.ajhg.2023.10.013

Replicative stress in gastroesophageal cancer is associated with chromosomal instability and sensitivity to DNA damage response inhibitors.

Sahgal P, Patil DT, Bala P, et al. Replicative stress in gastroesophageal cancer is associated with chromosomal instability and sensitivity to DNA damage response inhibitors. iScience. 2023;26(11):108169. doi:10.1016/j.isci.2023.108169

TWINGEN - protocol for an observational clinical biobank recall and biomarker study to identify individuals with high risk of Alzheimer's disease.

Vuoksimaa E, Saari TT, Aaltonen A, et al. TWINGEN - protocol for an observational clinical biobank recall and biomarker study to identify individuals with high risk of Alzheimer’s disease. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.11.03.23298018

Endothelial cell dysfunction in cardiac disease: driver or consequence?

Allbritton-King JD, García-Cardeña G. Endothelial cell dysfunction in cardiac disease: driver or consequence? Frontiers in cell and developmental biology. 2023;11:1278166. doi:10.3389/fcell.2023.1278166

Towards Allograft Longevity: Leveraging Omics Technologies to Improve Heart Transplant Outcomes.

Truby LK, Maamari D, Saha A, et al. Towards Allograft Longevity: Leveraging Omics Technologies to Improve Heart Transplant Outcomes. Current heart failure reports. 2023;20(6):493-503. doi:10.1007/s11897-023-00631-z

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Publications

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