Cheong JG, Ravishankar A, Sharma S, et al. Epigenetic memory of coronavirus infection in innate immune cells and their progenitors. Cell. 2023. doi:10.1016/j.cell.2023.07.019
Gene Regulation Observatory
Hu Y, Ma S, Kartha VK, et al. Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.28.533945
Hecht V, Dong K, Rajesh S, Shpilker P, Wekhande S, Shoresh N. Analyzing histone ChIP-seq data with a bin-based probability of being signal. PLoS computational biology. 2023;19(10):e1011568. doi:10.1371/journal.pcbi.1011568
Yin Q, Yang CH, Strelkova OS, et al. Revisiting chromatin packaging in mouse sperm. Genome research. 2023;33(12):2079-93. doi:10.1101/gr.277845.123
Gschwind AR, Mualim KS, Karbalayghareh A, et al. An encyclopedia of enhancer-gene regulatory interactions in the human genome. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.11.09.563812
Jiang K, Koob J, Chen XD, et al. Programmable eukaryotic protein synthesis with RNA sensors by harnessing ADAR. Nat Biotechnol. 2022. doi:10.1038/s41587-022-01534-5
Battaglia S, Dong K, Wu J, et al. Long-range phasing of dynamic, tissue-specific and allele-specific regulatory elements. Nat Genet. 2022;54(10):1504-1513. doi:10.1038/s41588-022-01188-8
Halford JL, Morrill VN, Choi SH, et al. Endophenotype effect sizes support variant pathogenicity in monogenic disease susceptibility genes. Nature communications. 2022;13(1):5106. doi:10.1038/s41467-022-32009-5
Kartha V, Duarte F, Hu Y, et al. Functional inference of gene regulation using single-cell multi-omics. Cell genomics. 2022;2(9). doi:10.1016/j.xgen.2022.100166
Nauffal V, Morrill VN, Jurgens SJ, et al. Monogenic and Polygenic Contributions to QTc Prolongation in the Population. Circulation. 2022;145(20):1524-1533. doi:10.1161/CIRCULATIONAHA.121.057261