Publications

Whole-genome sequencing uncovers two loci for coronary artery calcification and identifies ARSE as a regulator of vascular calcification.

de Vries PS, Conomos MP, Singh K, et al. Whole-genome sequencing uncovers two loci for coronary artery calcification and identifies ARSE as a regulator of vascular calcification. Nature cardiovascular research. 2023;2(12):1159-1172. doi:10.1038/s44161-023-00375-y

Federated benchmarking of medical artificial intelligence with MedPerf.

Karargyris A, Umeton R, Sheller MJ, et al. Federated benchmarking of medical artificial intelligence with MedPerf. Nature machine intelligence. 2023;5(7):799-810. doi:10.1038/s42256-023-00652-2

Exploring the complex spectrum of dominance and recessiveness in genetic cardiomyopathies.

Lipov A, Jurgens SJ, Mazzarotto F, et al. Exploring the complex spectrum of dominance and recessiveness in genetic cardiomyopathies. Nature cardiovascular research. 2023;2(11):1078-1094. doi:10.1038/s44161-023-00346-3

Pan-viral ORFs discovery using Massively Parallel Ribosome Profiling.

Weingarten-Gabbay S, Bauer MR, Stanton AC, et al. Pan-viral ORFs discovery using Massively Parallel Ribosome Profiling. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.09.26.559641

The HLA-II immunopeptidome of SARS-CoV-2.

Weingarten-Gabbay S, Chen DY, Sarkizova S, et al. The HLA-II immunopeptidome of SARS-CoV-2. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.05.26.542482

Initial Insights into the Genetic Variation Associated with Metformin Treatment Failure in Youth with Type 2 Diabetes.

Srinivasan S, Chen L, Udler M, et al. Initial Insights into the Genetic Variation Associated with Metformin Treatment Failure in Youth with Type 2 Diabetes. Pediatric diabetes. 2023;2023. doi:10.1155/2023/8883199

Base editor scanning charts the DNMT3A activity landscape.

Lue NZ, Garcia EM, Ngan K, Lee C, Doench JG, Liau BB. Base editor scanning charts the DNMT3A activity landscape. Nature chemical biology. 2023;19(2):176-186. doi:10.1038/s41589-022-01167-4

Making inroads to precision medicine for the treatment of autoimmune diseases: Harnessing genomic studies to better diagnose and treat complex disorders.

Baglaenko Y, Wagner C, Bhoj VG, et al. Making inroads to precision medicine for the treatment of autoimmune diseases: Harnessing genomic studies to better diagnose and treat complex disorders. Cambridge prisms. Precision medicine. 2023;1:e25. doi:10.1017/pcm.2023.14

A Plasma Metabolite Score Related to Psychological Distress and Diabetes Risk: A Nested Case-control Study in US Women.

Huang T, Zhu Y, Shutta KH, et al. A Plasma Metabolite Score Related to Psychological Distress and Diabetes Risk: A Nested Case-control Study in US Women. The Journal of clinical endocrinology and metabolism. 2023. doi:10.1210/clinem/dgad731

Olive oil consumption, plasma metabolites, and risk of type 2 diabetes and cardiovascular disease.

García-Gavilán JF, Babio N, Toledo E, et al. Olive oil consumption, plasma metabolites, and risk of type 2 diabetes and cardiovascular disease. Cardiovascular diabetology. 2023;22(1):340. doi:10.1186/s12933-023-02066-1