Publications

Deep learning to decode sites of RNA translation in normal and cancerous tissues.

Clauwaert J, McVey Z, Gupta R, Yannuzzi I, Menschaert G, Prensner JR. Deep learning to decode sites of RNA translation in normal and cancerous tissues. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.21.586110

Analysis of the limited accessory genome reveals potential pitfalls of pan-genome analysis approaches.

Marin MG, Wippel C, Quinones-Olvera N, et al. Analysis of the limited accessory genome reveals potential pitfalls of pan-genome analysis approaches. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.21.586149

Expanding the genetics and phenotypes of ocular congenital cranial dysinnervation disorders.

Jurgens JA, Barry BJ, Chan WM, et al. Expanding the genetics and phenotypes of ocular congenital cranial dysinnervation disorders. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.03.22.24304594

Artificial Intelligence in Oncology: Current Landscape, Challenges, and Future Directions.

Lotter W, Hassett MJ, Schultz N, Kehl KL, Van Allen EM, Cerami E. Artificial Intelligence in Oncology: Current Landscape, Challenges, and Future Directions. Cancer discovery. 2024:OF1-OF16. doi:10.1158/2159-8290.CD-23-1199

Genome-wide analyses identify 21 infertility loci and over 400 reproductive hormone loci across the allele frequency spectrum.

Venkatesh SS, Wittemans LBL, Palmer DS, et al. Genome-wide analyses identify 21 infertility loci and over 400 reproductive hormone loci across the allele frequency spectrum. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.03.19.24304530

Does diversity beget diversity? A scientometric analysis of over 150,000 studies and 49,000 authors published in high-impact medical journals between 2007 and 2022.

Charpignon ML, Matos J, Nakayama L, et al. Does diversity beget diversity? A scientometric analysis of over 150,000 studies and 49,000 authors published in high-impact medical journals between 2007 and 2022. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.03.21.24304695

Speciation within the complex: high-throughput whole genome sequencing reveals evidence of a putative new cryptic taxon in 'far-west' Africa.

Caputo B, De Marco CM, Pichler V, et al. Speciation within the complex: high-throughput whole genome sequencing reveals evidence of a putative new cryptic taxon in ’far-west’ Africa. Research square. 2024. doi:10.21203/rs.3.rs-3914444/v1

Modeling interpretable correspondence between cell state and perturbation response with CellCap.

Xu Y, Fleming S, Tegtmeyer M, McCarroll SA, Babadi M. Modeling interpretable correspondence between cell state and perturbation response with CellCap. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.14.585078

Primary nasal viral infection rewires the tissue-scale memory response.

Kazer SW, Match CM, Langan EM, et al. Primary nasal viral infection rewires the tissue-scale memory response. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2023.05.11.539887

CROPseq-multi: a versatile solution for multiplexed perturbation and decoding in pooled CRISPR screens.

Walton RT, Qin Y, Blainey PC. CROPseq-multi: a versatile solution for multiplexed perturbation and decoding in pooled CRISPR screens. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.17.585235

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Publications

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