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Publications

Multimodal analysis of the COVID-19-associated mucormycosis outbreak in Delhi, India indicates the convergence of clinical and environmental risk factors.

Chowdhary A, Gupta N, Wurster S, et al. Multimodal analysis of the COVID-19-associated mucormycosis outbreak in Delhi, India indicates the convergence of clinical and environmental risk factors. Mycoses. 2023. doi:10.1111/myc.13578

Single-nucleus RNA sequencing in ischemic cardiomyopathy reveals common transcriptional profile underlying end-stage heart failure.

Simonson B, Chaffin M, Hill MC, et al. Single-nucleus RNA sequencing in ischemic cardiomyopathy reveals common transcriptional profile underlying end-stage heart failure. Cell reports. 2023;42(2):112086. doi:10.1016/j.celrep.2023.112086

Author Correction: Systemic sclerosis gastrointestinal dysmotility: risk factors, pathophysiology, diagnosis and management.

McMahan ZH, Kulkarni S, Chen J, et al. Author Correction: Systemic sclerosis gastrointestinal dysmotility: risk factors, pathophysiology, diagnosis and management. Nature reviews. Rheumatology. 2023;19(3):191. doi:10.1038/s41584-023-00929-1

Mitochondrial single-cell ATAC-seq for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility.

Lareau CA, Liu V, Muus C, et al. Mitochondrial single-cell ATAC-seq for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility. Nature protocols. 2023. doi:10.1038/s41596-022-00795-3

Chromosome-length genome assembly of Teladorsagia circumcincta - a globally important helminth parasite in livestock.

Hassan SU, Chua EG, Paz EA, et al. Chromosome-length genome assembly of Teladorsagia circumcincta - a globally important helminth parasite in livestock. BMC genomics. 2023;24(1):74. doi:10.1186/s12864-023-09172-0

Impaired protein hydroxylase activity causes replication stress and developmental abnormalities in humans.

Fletcher SC, Hall C, Kennedy TJ, et al. Impaired protein hydroxylase activity causes replication stress and developmental abnormalities in humans. The Journal of clinical investigation. 2023;133(7). doi:10.1172/JCI152784

Natural variation in gene expression and viral susceptibility revealed by neural progenitor cell villages.

Wells MF, Nemesh J, Ghosh S, et al. Natural variation in gene expression and viral susceptibility revealed by neural progenitor cell villages. Cell stem cell. 2023;30(3):312-332.e13. doi:10.1016/j.stem.2023.01.010

Clonal Hematopoiesis and Cardiac Transplantation: the intersection of inflammation and arteriopathy.

Bhattacharya R, Libby P. Clonal Hematopoiesis and Cardiac Transplantation: the intersection of inflammation and arteriopathy. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons. 2023. doi:10.1016/j.ajt.2023.02.017

Efficient in vivo genome editing prevents hypertrophic cardiomyopathy in mice.

Reichart D, Newby GA, Wakimoto H, et al. Efficient in vivo genome editing prevents hypertrophic cardiomyopathy in mice. Nature medicine. 2023;29(2):412-421. doi:10.1038/s41591-022-02190-7

TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics.

Mages S, Moriel N, Avraham-Davidi I, et al. TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics. Nature biotechnology. 2023. doi:10.1038/s41587-023-01657-3