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Publications

MaAsLin 3: Refining and extending generalized multivariable linear models for meta-omic association discovery.

Nickols WA, Kuntz T, Shen J, et al. MaAsLin 3: Refining and extending generalized multivariable linear models for meta-omic association discovery. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.12.13.628459

Genetic vulnerability and adverse mental health outcomes following mild traumatic brain injury: a meta-analysis of CENTER-TBI and TRACK-TBI cohorts.

Kals M, Wilson L, Levey DF, et al. Genetic vulnerability and adverse mental health outcomes following mild traumatic brain injury: a meta-analysis of CENTER-TBI and TRACK-TBI cohorts. EClinicalMedicine. 2024;78:102956. doi:10.1016/j.eclinm.2024.102956

The Scalable Variant Call Representation: Enabling Genetic Analysis Beyond One Million Genomes.

Poterba T, Vittal C, King D, et al. The Scalable Variant Call Representation: Enabling Genetic Analysis Beyond One Million Genomes. Bioinformatics (Oxford, England). 2024. doi:10.1093/bioinformatics/btae746

The Scalable Variant Call Representation: Enabling Genetic Analysis Beyond One Million Genomes.

Poterba T, Vittal C, King D, et al. The Scalable Variant Call Representation: Enabling Genetic Analysis Beyond One Million Genomes. Bioinformatics (Oxford, England). 2024. doi:10.1093/bioinformatics/btae746

Establishing methods to monitor H5N1 influenza virus in dairy cattle milk.

Stachler E, Gnirke A, McMahon K, et al. Establishing methods to monitor H5N1 influenza virus in dairy cattle milk. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.12.04.24318491

A novel multi-organ male model of alcohol-induced acute-on-chronic liver failure reveals NET-mediated hepatocellular death which is prevented by RIPK3 inhibition.

Ortega-Ribera M, Zhuang Y, Babuta M, et al. A novel multi-organ male model of alcohol-induced acute-on-chronic liver failure reveals NET-mediated hepatocellular death which is prevented by RIPK3 inhibition. Cellular and molecular gastroenterology and hepatology. 2024:101446. doi:10.1016/j.jcmgh.2024.101446

Immunosuppressive dura-derived macrophages in leptomeningeal metastasis.

Kilian M, Quintana FJ. Immunosuppressive dura-derived macrophages in leptomeningeal metastasis. Nature cancer. 2024;5(12):1791-1792. doi:10.1038/s43018-024-00859-1

Pan-KRAS inhibitors BI-2493 and BI-2865 display potent anti-tumor activity in tumors with KRAS wild-type allele amplification.

Tedeschi A, Schischlik F, Rocchetti F, et al. Pan-KRAS inhibitors BI-2493 and BI-2865 display potent anti-tumor activity in tumors with KRAS wild-type allele amplification. Molecular cancer therapeutics. 2024. doi:10.1158/1535-7163.MCT-24-0386

Low birth weight associations with cardiac structure and function in adults after arterial switch for transposition of the great arteries.

Schuermans A, Santens B, Van den Eynde J, et al. Low birth weight associations with cardiac structure and function in adults after arterial switch for transposition of the great arteries. International journal of cardiology. Congenital heart disease. 2024;18:100550. doi:10.1016/j.ijcchd.2024.100550

Response of the gut microbiome and metabolome to dietary fiber in healthy dogs.

Bhosle A, Jackson MI, Walsh AM, Franzosa EA, Badri D V, Huttenhower C. Response of the gut microbiome and metabolome to dietary fiber in healthy dogs. mSystems. 2024:e0045224. doi:10.1128/msystems.00452-24