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Publications

Enhanced Production of Lipid Mediators in Plasma and Activation of DNA Damage Pathways in PBMCs Are Correlated With the Severity of Ancestral SARS-CoV-2 Infection.

Tomalka JA, Owings A, Galeas-Pena M, et al. Enhanced Production of Lipid Mediators in Plasma and Activation of DNA Damage Pathways in PBMCs Are Correlated With the Severity of Ancestral SARS-CoV-2 Infection. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2025;39(9):e70600. doi:10.1096/fj.202403195R

Self-Assembly of Nanogold Triplets on Trimeric Viral Proteins for Infectious Disease Diagnosis.

Liu W, Soliman A, Emam HE, et al. Self-Assembly of Nanogold Triplets on Trimeric Viral Proteins for Infectious Disease Diagnosis. ACS nano. 2025;19(18):17514-17524. doi:10.1021/acsnano.4c17685

Single-cell elderly blood-CSF atlas implicates peripherally influenced immune dysregulation in normal pressure hydrocephalus.

Duy PQ, Kiziltug E, Greenberg ABW, et al. Single-cell elderly blood-CSF atlas implicates peripherally influenced immune dysregulation in normal pressure hydrocephalus. Proceedings of the National Academy of Sciences of the United States of America. 2025;122(19):e2412159122. doi:10.1073/pnas.2412159122

Microglia transcriptional states and their functional significance: Context drives diversity.

Depp C, Doman JL, Hingerl M, Xia J, Stevens B. Microglia transcriptional states and their functional significance: Context drives diversity. Immunity. 2025;58(5):1052-1067. doi:10.1016/j.immuni.2025.04.009

Longitudinal profiling of low-abundance strains in microbiomes with ChronoStrain.

Kim Y, Worby CJ, Acharya S, et al. Longitudinal profiling of low-abundance strains in microbiomes with ChronoStrain. Nature microbiology. 2025;10(5):1184-1197. doi:10.1038/s41564-025-01983-z

Associations of APOE variants with sphingomyelin and cholesterol metabolites across the life-course in diverse populations.

Lee S, Kelly RS, Chen Y, et al. Associations of APOE variants with sphingomyelin and cholesterol metabolites across the life-course in diverse populations. Metabolomics : Official journal of the Metabolomic Society. 2025;21(3):64. doi:10.1007/s11306-025-02256-w

Pancreatic cancer-restricted cryptic antigens are targets for T cell recognition.

Ely ZA, Kulstad ZJ, Gunaydin G, et al. Pancreatic cancer-restricted cryptic antigens are targets for T cell recognition. Science (New York, N.Y.). 2025;388(6747):eadk3487. doi:10.1126/science.adk3487

Early dynamics of clinical and laboratory parameters predict primary refractory disease in patients with metastatic urothelial carcinoma receiving atezolizumab.

Graser CJ, McDonald TO, Catalano PJ, Sonpavde G, Michor F. Early dynamics of clinical and laboratory parameters predict primary refractory disease in patients with metastatic urothelial carcinoma receiving atezolizumab. Journal for immunotherapy of cancer. 2025;13(5). doi:10.1136/jitc-2025-011740

Pitfalls of bacterial pan-genome analysis approaches: a case study of Mycobacterium tuberculosis and two less clonal bacterial species.

Marin MG, Quinones-Olvera N, Wippel C, et al. Pitfalls of bacterial pan-genome analysis approaches: a case study of Mycobacterium tuberculosis and two less clonal bacterial species. Bioinformatics (Oxford, England). 2025;41(5). doi:10.1093/bioinformatics/btaf219

Patient agency and large language models in worldwide encoding of equity.

Armoundas AA, Loscalzo J. Patient agency and large language models in worldwide encoding of equity. NPJ digital medicine. 2025;8(1):258. doi:10.1038/s41746-025-01598-y