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Publications

Creating and troubleshooting microscopy analysis workflows: Common challenges and common solutions.

Cimini BA. Creating and troubleshooting microscopy analysis workflows: Common challenges and common solutions. Journal of microscopy. 2024. doi:10.1111/jmi.13288

An organometallic swap strategy for bottlebrush polymer-protein conjugate synthesis.

Liu B, Rodriguez J, Kilgallon LJ, et al. An organometallic swap strategy for bottlebrush polymer-protein conjugate synthesis. Chemical communications (Cambridge, England). 2024. doi:10.1039/d4cc00293h

Phenome-wide Mendelian randomisation analysis of 378,142 cases reveals risk factors for eight common cancers.

Went M, Sud A, Mills C, et al. Phenome-wide Mendelian randomisation analysis of 378,142 cases reveals risk factors for eight common cancers. Nature communications. 2024;15(1):2637. doi:10.1038/s41467-024-46927-z

Prenatal and postnatal exposure to antibiotics and risk of food allergy in the offspring: A nationwide birth cohort study in South Korea.

Oh J, Lee M, Park J, et al. Prenatal and postnatal exposure to antibiotics and risk of food allergy in the offspring: A nationwide birth cohort study in South Korea. Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology. 2024;35(3):e14114. doi:10.1111/pai.14114

Deep Learning to Estimate Cardiovascular Risk From Chest Radiographs : A Risk Prediction Study.

Weiss J, Raghu VK, Paruchuri K, et al. Deep Learning to Estimate Cardiovascular Risk From Chest Radiographs : A Risk Prediction Study. Annals of internal medicine. 2024. doi:10.7326/M23-1898

Immune Profiling of Vulvar Squamous Cell Cancer Discovers a Macrophage-rich Subtype Associated with Poor Prognosis.

Condic M, Rohr A, Riemann S, et al. Immune Profiling of Vulvar Squamous Cell Cancer Discovers a Macrophage-rich Subtype Associated with Poor Prognosis. Cancer research communications. 2024;4(3):861-875. doi:10.1158/2767-9764.CRC-22-0366

Spectral Flow Cytometry Methods and Pipelines for Comprehensive Immunoprofiling of Human Peripheral Blood and Bone Marrow.

Spasic M, Ogayo ER, Parsons AM, Mittendorf EA, van Galen P, McAllister SS. Spectral Flow Cytometry Methods and Pipelines for Comprehensive Immunoprofiling of Human Peripheral Blood and Bone Marrow. Cancer research communications. 2024;4(3):895-910. doi:10.1158/2767-9764.CRC-23-0357

A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment.

Zhu B, Bai Y, Yeo YY, et al. A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.04.583400

De novo detection of somatic variants in long-read single-cell RNA sequencing data.

Dondi A, Borgsmüller N, Ferreira PF, et al. De novo detection of somatic variants in long-read single-cell RNA sequencing data. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.06.583775

Deep sequencing of proteotoxicity modifier genes uncovers a Presenilin-2/beta-amyloid-actin genetic risk module shared among alpha-synucleinopathies.

Nazeen S, Wang X, Zielinski D, et al. Deep sequencing of proteotoxicity modifier genes uncovers a Presenilin-2/beta-amyloid-actin genetic risk module shared among alpha-synucleinopathies. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.03.03.583145