Jain A, Charpignon ML, Chen IY, Philippakis A, Alaa A. Generating new drug repurposing hypotheses using disease-specific hypergraphs. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2024;29:261-275.
Publications
Yoon H, Rutter JC, Der Li Y, Ebert BL. Induced protein degradation for therapeutics: past, present, and future. The Journal of clinical investigation. 2024;134(1). doi:10.1172/JCI175265
Breeze CE, Haugen E, Gutierrez-Arcelus M, et al. FORGEdb: a tool for identifying candidate functional variants and uncovering target genes and mechanisms for complex diseases. Genome biology. 2024;25(1):3. doi:10.1186/s13059-023-03126-1
Shaban M, Bai Y, Qiu H, et al. MAPS: pathologist-level cell type annotation from tissue images through machine learning. Nature communications. 2024;15(1):28. doi:10.1038/s41467-023-44188-w
Harding HB, Kwaku GN, Reardon CM, et al. Candida albicans extracellular vesicles trigger type I IFN signalling via cGAS and STING. Nature microbiology. 2024;9(1):95-107. doi:10.1038/s41564-023-01546-0
Zhang Q, Goswami S, Yilmaz O. Microbial regulation of ferroptosis in cancer. Nature cell biology. 2024;26(1):41-42. doi:10.1038/s41556-023-01321-7
Schuermans A, Truong B, Ardissino M, et al. Genetic Associations of Circulating Cardiovascular Proteins With Gestational Hypertension and Preeclampsia. JAMA cardiology. 2024. doi:10.1001/jamacardio.2023.4994
Seal S, Carreras-Puigvert J, Singh S, Carpenter AE, Spjuth O, Bender A. From Pixels to Phenotypes: Integrating Image-Based Profiling with Cell Health Data Improves Interpretability. Molecular biology of the cell. 2024:mbcE23080298. doi:10.1091/mbc.E23-08-0298
Anthony KM, Collins JM, Love SAM, et al. Radon Exposure, Clonal Hematopoiesis, and Stroke Susceptibility in the Women’s Health Initiative. Neurology. 2024;102(2):e208055. doi:10.1212/WNL.0000000000208055
Hogan CH, Owens SM, Reynoso G V, et al. Multifaceted roles for STAT3 in gammaherpesvirus latency revealed through B cell knockout models. mBio. 2024:e0299823. doi:10.1128/mbio.02998-23