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Publications

Reconstruction of single-cell lineage trajectories and identification of diversity in fates during the epithelial-to-mesenchymal transition.

Cheng YC, Zhang Y, Tripathi S, et al. Reconstruction of single-cell lineage trajectories and identification of diversity in fates during the epithelial-to-mesenchymal transition. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(32):e2406842121. doi:10.1073/pnas.2406842121

An essential role for Cmtr2 in mammalian embryonic development.

Yermalovich A V, Mohsenin Z, Cowdin M, et al. An essential role for Cmtr2 in mammalian embryonic development. Developmental biology. 2024. doi:10.1016/j.ydbio.2024.07.019

Innovations towards immunopeptidomics.

Abelin JG, Cox AL. Innovations towards immunopeptidomics. Molecular & cellular proteomics : MCP. 2024:100823. doi:10.1016/j.mcpro.2024.100823

Evaluating batch correction methods for image-based cell profiling.

Arevalo J, Su E, Ewald JD, van Dijk R, Carpenter AE, Singh S. Evaluating batch correction methods for image-based cell profiling. Nature communications. 2024;15(1):6516. doi:10.1038/s41467-024-50613-5

Structural basis for VLDLR recognition by eastern equine encephalitis virus.

Yang P, Li W, Fan X, et al. Structural basis for VLDLR recognition by eastern equine encephalitis virus. Nature communications. 2024;15(1):6548. doi:10.1038/s41467-024-50887-9

Chimeric Antigen Receptor T Cell with an Inducible Caspase-9 Suicide Gene Eradicates Uveal Melanoma Liver Metastases via B7-H3 Targeting.

Ventin M, Cattaneo G, Arya S, et al. Chimeric Antigen Receptor T Cell with an Inducible Caspase-9 Suicide Gene Eradicates Uveal Melanoma Liver Metastases via B7-H3 Targeting. Clinical cancer research : an official journal of the American Association for Cancer Research. 2024;30(15):3243-3258. doi:10.1158/1078-0432.CCR-24-0071

Exclusion of sulfide:quinone oxidoreductase from mitochondria causes Leigh-like disease in mice by impairing sulfide metabolism.

Kanemaru E, Shimoda K, Marutani E, et al. Exclusion of sulfide:quinone oxidoreductase from mitochondria causes Leigh-like disease in mice by impairing sulfide metabolism. The Journal of clinical investigation. 2024;134(15). doi:10.1172/JCI170994

MalKinID: A Likelihood-Based Model for Identifying Malaria Parasite Genealogical Relationships Using Identity-by-Descent.

Wong W, Wang L, Schaffner SS, et al. MalKinID: A Likelihood-Based Model for Identifying Malaria Parasite Genealogical Relationships Using Identity-by-Descent. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.07.12.603328

Multi-omics characterization of type 2 diabetes associated genetic variation.

Mandla R, Lorenz K, Yin X, et al. Multi-omics characterization of type 2 diabetes associated genetic variation. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.07.15.24310282

Chimeric Antigen Receptor T Cell with an Inducible Caspase-9 Suicide Gene Eradicates Uveal Melanoma Liver Metastases via B7-H3 Targeting.

Ventin M, Cattaneo G, Arya S, et al. Chimeric Antigen Receptor T Cell with an Inducible Caspase-9 Suicide Gene Eradicates Uveal Melanoma Liver Metastases via B7-H3 Targeting. Clinical cancer research : an official journal of the American Association for Cancer Research. 2024;30(15):3243-3258. doi:10.1158/1078-0432.CCR-24-0071