Publications

Evaluating long-read de novo assembly tools for eukaryotic genomes: insights and considerations.

Cosma BM, Zade RSH, Jordan EN, et al. Evaluating long-read de novo assembly tools for eukaryotic genomes: insights and considerations. GigaScience. 2022;12. doi:10.1093/gigascience/giad100

MLcps: machine learning cumulative performance score for classification problems.

Akshay A, Abedi M, Shekarchizadeh N, et al. MLcps: machine learning cumulative performance score for classification problems. GigaScience. 2022;12. doi:10.1093/gigascience/giad108

The mRNA vaccine BNT162b2 demonstrates impaired T1 immunogenicity in human elders and aged mice .

Brook B, Fatou B, Checkervarty AK, et al. The mRNA vaccine BNT162b2 demonstrates impaired T1 immunogenicity in human elders and aged mice . Research square. 2022. doi:10.21203/rs.3.rs-2395118/v1

Protein prediction for trait mapping in diverse populations.

Schubert R, Geoffroy E, Gregga I, et al. Protein prediction for trait mapping in diverse populations. PloS one. 2022;17(2):e0264341. doi:10.1371/journal.pone.0264341

Plasma Metabolite Profiles Associated with the Amount and Source of Meat and Fish Consumption and the Risk of Type 2 Diabetes.

García-Gavilán J, Nishi SK, Paz-Graniel I, et al. Plasma Metabolite Profiles Associated with the Amount and Source of Meat and Fish Consumption and the Risk of Type 2 Diabetes. Molecular nutrition & food research. 2022;66(23):e2200145. doi:10.1002/mnfr.202200145

A framework for detecting noncoding rare-variant associations of large-scale whole-genome sequencing studies.

Li Z, Li X, Zhou H, et al. A framework for detecting noncoding rare-variant associations of large-scale whole-genome sequencing studies. Nature methods. 2022;19(12):1599-1611. doi:10.1038/s41592-022-01640-x

Psychological distress and metabolomic markers: A systematic review of posttraumatic stress disorder, anxiety, and subclinical distress.

Zhu Y, Jha SC, Shutta KH, et al. Psychological distress and metabolomic markers: A systematic review of posttraumatic stress disorder, anxiety, and subclinical distress. Neuroscience and biobehavioral reviews. 2022;143:104954. doi:10.1016/j.neubiorev.2022.104954

Development and validation of a metabolite index for obstructive sleep apnea across race/ethnicities.

Zhang Y, Ngo D, Yu B, et al. Development and validation of a metabolite index for obstructive sleep apnea across race/ethnicities. Scientific reports. 2022;12(1):21805. doi:10.1038/s41598-022-26321-9

Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism.

Vatanen T, Jabbar KS, Ruohtula T, et al. Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism. Cell. 2022;185(26):4921-4936.e15. doi:10.1016/j.cell.2022.11.023

Alcohol use and poor sleep quality: a longitudinal twin study across 36 years.

Helaakoski V, Kaprio J, Hublin C, Ollila HM, Latvala A. Alcohol use and poor sleep quality: a longitudinal twin study across 36 years. Sleep advances : a journal of the Sleep Research Society. 2022;3(1):zpac023. doi:10.1093/sleepadvances/zpac023

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Publications

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