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Publications

Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis.

Borovská I, Zhang C, Dülk SLJ, et al. Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis. Nature biotechnology. 2025. doi:10.1038/s41587-025-02739-0

Mendelian randomization analysis provides insights into the relationship between inflammatory bowel disease and skin cancer.

Rashid S, Usoltsev D, Gupta S, Artomov M, Tsao H. Mendelian randomization analysis provides insights into the relationship between inflammatory bowel disease and skin cancer. Molecular and clinical oncology. 2025;23(3):83. doi:10.3892/mco.2025.2878

Human Genetics Informing Drug Development in Cardiovascular Disease: Interleukin-6 Signaling as a Case Study.

deGoma E, Walsh J, Georgakis MK. Human Genetics Informing Drug Development in Cardiovascular Disease: Interleukin-6 Signaling as a Case Study. Circulation. Genomic and precision medicine. 2025;18(4):e005103. doi:10.1161/CIRCGEN.125.005103

Evaluation of Lipoprotein(a) as a Prognostic Marker of Extracoronary Atherosclerotic Vascular Disease Progression.

Bellomo TR, Bramel EE, Lee J, et al. Evaluation of Lipoprotein(a) as a Prognostic Marker of Extracoronary Atherosclerotic Vascular Disease Progression. Circulation. 2025;152(9):585-598. doi:10.1161/CIRCULATIONAHA.124.073579

The plasmepsin-piperaquine paradox persists in Plasmodium falciparum.

Walsh B, Summers RL, Rangel GW, et al. The plasmepsin-piperaquine paradox persists in Plasmodium falciparum. PLoS pathogens. 2025;21(7):e1012779. doi:10.1371/journal.ppat.1012779

Longitudinal Meta-cohort study protocol using systems biology to identify vaccine safety biomarkers.

Diray-Arce J, Chang AC, Moradipoor S, et al. Longitudinal Meta-cohort study protocol using systems biology to identify vaccine safety biomarkers. Vaccine. 2025;62:127504. doi:10.1016/j.vaccine.2025.127504

Proteogenomics-enabled discovery of novel small open reading frame (sORF)-encoded polypeptides in human and mouse tissues.

Yang M, Xie Y, Wang L, et al. Proteogenomics-enabled discovery of novel small open reading frame (sORF)-encoded polypeptides in human and mouse tissues. Nucleic acids research. 2025;53(14). doi:10.1093/nar/gkaf687

3D bioprinting of plant and animal cell-based hybrid food.

Maharjan S, Yamashita C, Lee CP, et al. 3D bioprinting of plant and animal cell-based hybrid food. Nature communications. 2025;16(1):6935. doi:10.1038/s41467-025-61996-4

Rare germline variant in NFATC4 associated with familial CLL.

Itchaki G, Bai H, Tiao G, et al. Rare germline variant in NFATC4 associated with familial CLL. Leukemia. 2025;39(10):2547-2550. doi:10.1038/s41375-025-02713-4

Defibrotide for Protecting Against and Managing Endothelial Injury in Hematologic Malignancies and COVID-19.

Richardson E, Mo CC, Calabretta E, et al. Defibrotide for Protecting Against and Managing Endothelial Injury in Hematologic Malignancies and COVID-19. Biomolecules. 2025;15(7). doi:10.3390/biom15071004