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Publications

Body dissatisfaction widens the racial disparities of Benzophenone-3, a chemical biomarker of personal care and consumer product usage.

Nguyen VK, Zimmerman S, Colacino J, Jolliet O, Patel CJ. Body dissatisfaction widens the racial disparities of Benzophenone-3, a chemical biomarker of personal care and consumer product usage. medRxiv : the preprint server for health sciences. 2024. doi:10.1101/2024.08.26.24312258

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.

Deutsch EW, Kok LW, Mudge JM, et al. High-quality peptide evidence for annotating non-canonical open reading frames as human proteins. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.09.09.612016

Prediction and functional interpretation of inter-chromosomal genome architecture from DNA sequence with TwinC.

Jha A, Hristov B, Wang X, et al. Prediction and functional interpretation of inter-chromosomal genome architecture from DNA sequence with TwinC. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.09.16.613355

Scalable, compressed phenotypic screening using pooled perturbations.

Liu N, Kattan WE, Mead BE, et al. Scalable, compressed phenotypic screening using pooled perturbations. Nature biotechnology. 2024. doi:10.1038/s41587-024-02403-z

A call to action to scale up research and clinical genomic data sharing.

Stark Z, Glazer D, Hofmann O, et al. A call to action to scale up research and clinical genomic data sharing. Nature reviews. Genetics. 2024. doi:10.1038/s41576-024-00776-0

Salivary biomarkers: a promising approach for predicting immunotherapy response in head and neck cancers.

Dehkordi AN, Maddahi M, Vafa P, Ebrahimi N, Aref AR. Salivary biomarkers: a promising approach for predicting immunotherapy response in head and neck cancers. Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico. 2024. doi:10.1007/s12094-024-03742-8

Pervasive findings of directional selection realize the promise of ancient DNA to elucidate human adaptation.

Akbari A, Barton AR, Gazal S, et al. Pervasive findings of directional selection realize the promise of ancient DNA to elucidate human adaptation. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.09.14.613021

Genetic Architectures of Medical Images Revealed by Registration of Multiple Modalities.

Friedman SF, Moran GE, Rakic M, Phillipakis A. Genetic Architectures of Medical Images Revealed by Registration of Multiple Modalities. Bioinformatics and biology insights. 2024;18:11779322241282489. doi:10.1177/11779322241282489

Glioblastoma-cortical organoids recapitulate cell state heterogeneity and intercellular transfer.

Mangena V, Chanoch-Myers R, Sartore R, et al. Glioblastoma-cortical organoids recapitulate cell state heterogeneity and intercellular transfer. Cancer discovery. 2024. doi:10.1158/2159-8290.CD-23-1336

In Vivo CRISPR Screening Reveals CHD7 as a Positive Regulator of Short-lived Effector Cells.

LaFleur MW, D’Andrea JM, Patterson DG, et al. In Vivo CRISPR Screening Reveals CHD7 as a Positive Regulator of Short-lived Effector Cells. Journal of immunology (Baltimore, Md. : 1950). 2024. doi:10.4049/jimmunol.2400213