Publications

Foundation models for generalizable electrocardiogram interpretation: comparison of supervised and self-supervised electrocardiogram foundation models.

Nolin-Lapalme A, Sowa A, Delfrate J, et al. Foundation models for generalizable electrocardiogram interpretation: comparison of supervised and self-supervised electrocardiogram foundation models. medRxiv : the preprint server for health sciences. 2025. doi:10.1101/2025.03.02.25322575

A multi-metabolite signature robustly predicts long-term mortality in the PREDIMED trial and several US cohorts.

Fernández-Duval G, Razquin C, Wang F, et al. A multi-metabolite signature robustly predicts long-term mortality in the PREDIMED trial and several US cohorts. Metabolism: clinical and experimental. 2025:156195. doi:10.1016/j.metabol.2025.156195

De novo detection of somatic variants in high-quality long-read single-cell RNA sequencing data.

Dondi A, Borgsmüller N, Ferreira PF, et al. De novo detection of somatic variants in high-quality long-read single-cell RNA sequencing data. Genome research. 2025. doi:10.1101/gr.279281.124

Comparative structural insights and functional analysis for the distinct unbound states of Human AGO proteins.

Kakoulidis P, Theotoki EI, Pantazopoulou VI, et al. Comparative structural insights and functional analysis for the distinct unbound states of Human AGO proteins. Scientific reports. 2025;15(1):9432. doi:10.1038/s41598-025-91849-5

The somatic mutation landscape of normal gastric epithelium.

Coorens THH, Collord G, Jung H, et al. The somatic mutation landscape of normal gastric epithelium. Nature. 2025. doi:10.1038/s41586-025-08708-6

Corticosteroid-regulated gene transcription in SH-SY5Y-derived neurons: Insights into the mineralocorticoid and glucocorticoid receptor-mediated response.

Lugenbühl JF, Snijders C, Pernia CD, Estruch MS, Kenis G, Daskalakis NP. Corticosteroid-regulated gene transcription in SH-SY5Y-derived neurons: Insights into the mineralocorticoid and glucocorticoid receptor-mediated response. Journal of neuroendocrinology. 2025:e70021. doi:10.1111/jne.70021

Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods.

Tercan B, Apolonio VH, Chagas VS, et al. Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods. STAR protocols. 2025;6(2):103681. doi:10.1016/j.xpro.2025.103681

Clonal Hematopoiesis of Indeterminate Potential and Incident Hypertension: Results From the Women's Health Initiative.

Haring B, Aragaki AK, Shimbo D, et al. Clonal Hematopoiesis of Indeterminate Potential and Incident Hypertension: Results From the Women’s Health Initiative. Hypertension (Dallas, Tex. : 1979). 2025;82(4):e70-e72. doi:10.1161/HYPERTENSIONAHA.124.24482

Affinity selection-mass spectrometry with linearizable macrocyclic peptide libraries.

Lee MA, Brown JS, Farquhar CE, Loas A, Pentelute BL. Affinity selection-mass spectrometry with linearizable macrocyclic peptide libraries. Science advances. 2025;11(12):eadr1018. doi:10.1126/sciadv.adr1018

Genome-wide CRISPR screen identifies IRF1 and TFAP4 as transcriptional regulators of Galectin-9 in T cell acute lymphoblastic leukemia.

Wiggers CRM, Yüzügüldü B, Tadros NG, et al. Genome-wide CRISPR screen identifies IRF1 and TFAP4 as transcriptional regulators of Galectin-9 in T cell acute lymphoblastic leukemia. Science advances. 2025;11(12):eads8351. doi:10.1126/sciadv.ads8351

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Publications

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