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Publications

Association of Leucocyte Telomere Length With Stroke, Dementia, and Late-Life Depression: The Role of Modifiable Risk Factors.

Kimball TN, Prapiadou S, Tack RWP, et al. Association of Leucocyte Telomere Length With Stroke, Dementia, and Late-Life Depression: The Role of Modifiable Risk Factors. Neurology. 2025;105(1):e213794. doi:10.1212/WNL.0000000000213794

Cell states and neighborhoods in distinct clinical stages of primary and metastatic esophageal adenocarcinoma.

Yates J, Mathey-Andrews C, Park J, et al. Cell states and neighborhoods in distinct clinical stages of primary and metastatic esophageal adenocarcinoma. Cell reports. Medicine. 2025;6(6):102188. doi:10.1016/j.xcrm.2025.102188

Brain implantation of soft bioelectronics via embryonic development.

Sheng H, Liu R, Li Q, et al. Brain implantation of soft bioelectronics via embryonic development. Nature. 2025;642(8069):954-964. doi:10.1038/s41586-025-09106-8

Bacterial peptide deformylase inhibitors induce prophages in competitors.

Chen J, Pfeifer K, Steensen K, et al. Bacterial peptide deformylase inhibitors induce prophages in competitors. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.06.06.656871

Neural Spectral Prediction for Structure Elucidation with Tandem Mass Spectrometry.

Wang R, Manjrekar M, Mahjour B, et al. Neural Spectral Prediction for Structure Elucidation with Tandem Mass Spectrometry. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.28.656653

Diverse modes of T cell receptor sequence convergence define unique functional and cellular phenotypes.

Schattgen S, Vegesana K, Hazelton WD, et al. Diverse modes of T cell receptor sequence convergence define unique functional and cellular phenotypes. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.31.657155

Mechanism of age-related accumulation of mitochondrial DNA mutations in human blood.

Gupta R, Durham TJ, Chau G, et al. Mechanism of age-related accumulation of mitochondrial DNA mutations in human blood. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.25.655566

Human genetic variation shapes the response of neurons to interferons.

Andzelm MM, Bolshakova S, Pettinari N, et al. Human genetic variation shapes the response of neurons to interferons. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.28.653507

SCOT+: A Comprehensive Software Suite for Single-Cell alignment Using Optimal Transport.

Baker C, Pham T, Demetci P, et al. SCOT+: A Comprehensive Software Suite for Single-Cell alignment Using Optimal Transport. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.21.655322

Brieflow: An Integrated Computational Pipeline for High-Throughput Analysis of Optical Pooled Screening Data.

Di Bernardo M, Kern RS, Mallar A, Nutter-Upham A, Blainey PC, Cheeseman I. Brieflow: An Integrated Computational Pipeline for High-Throughput Analysis of Optical Pooled Screening Data. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.05.26.656231