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Publications

Rare missense variants of the leukocyte common antigen related receptor (LAR) display reduced activity in transcellular adhesion and synapse formation.

Kaas M, Chofflet N, Bicer D, et al. Rare missense variants of the leukocyte common antigen related receptor (LAR) display reduced activity in transcellular adhesion and synapse formation. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.02.16.638491

A sequence context-based approach for classifying tumor structural variants without paired normal samples.

Chukwu W, Lee S, Crane A, et al. A sequence context-based approach for classifying tumor structural variants without paired normal samples. Cell reports methods. 2025:100991. doi:10.1016/j.crmeth.2025.100991

Artificial variables help to avoid over-clustering in single-cell RNA sequencing.

DenAdel A, Ramseier ML, Navia AW, et al. Artificial variables help to avoid over-clustering in single-cell RNA sequencing. American journal of human genetics. 2025. doi:10.1016/j.ajhg.2025.02.014

Bi-allelic MED16 variants cause a MEDopathy with intellectual disability, motor delay, and craniofacial, cardiac, and limb malformations.

Guillouet C, Agostini V, Baujat G, et al. Bi-allelic MED16 variants cause a MEDopathy with intellectual disability, motor delay, and craniofacial, cardiac, and limb malformations. American journal of human genetics. 2025. doi:10.1016/j.ajhg.2025.02.016

Parts and ICRAFTs: Finding new immunotherapy targets.

Bi K, Yates KB. Parts and ICRAFTs: Finding new immunotherapy targets. Immunity. 2025;58(3):529-531. doi:10.1016/j.immuni.2025.02.016

High continuity of forager ancestry in the Neolithic period of the eastern Maghreb.

Lipson M, Ringbauer H, Lucarini G, et al. High continuity of forager ancestry in the Neolithic period of the eastern Maghreb. Nature. 2025. doi:10.1038/s41586-025-08699-4

TGFβ links EBV to multisystem inflammatory syndrome in children.

Goetzke CC, Massoud M, Frischbutter S, et al. TGFβ links EBV to multisystem inflammatory syndrome in children. Nature. 2025. doi:10.1038/s41586-025-08697-6

Continuous time and dynamic suicide attempt risk prediction with neural ordinary differential equations.

Sheu YH, Simm J, Wang B, Lee H, Smoller JW. Continuous time and dynamic suicide attempt risk prediction with neural ordinary differential equations. NPJ digital medicine. 2025;8(1):161. doi:10.1038/s41746-025-01552-y

Rapid traversal of vast chemical space using machine learning-guided docking screens.

Luttens A, de Vaca IC, Sparring L, et al. Rapid traversal of vast chemical space using machine learning-guided docking screens. Nature computational science. 2025. doi:10.1038/s43588-025-00777-x

Nucleotide level mapping of uracils in murine heavy chain switch regions shows correlation between uracilation and positions of switch junctions created during class-switch recombination.

Mohamad-Ramshan R, Sakhtemani R, Butt Y, Lawrence MS, Bhagwat AS. Nucleotide level mapping of uracils in murine heavy chain switch regions shows correlation between uracilation and positions of switch junctions created during class-switch recombination. NAR molecular medicine. 2025;2(1):ugaf003. doi:10.1093/narmme/ugaf003