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Publications

Tobacco smoke exposure recruits inflammatory airspace monocytes that establish permissive lung niches for .

Corleis B, Tzouanas CN, Wadsworth MH, et al. Tobacco smoke exposure recruits inflammatory airspace monocytes that establish permissive lung niches for . Science translational medicine. 2023;15(725):eadg3451. doi:10.1126/scitranslmed.adg3451

Dynamic regulatory elements in single-cell multimodal data implicate key immune cell states enriched for autoimmune disease heritability.

Gupta A, Weinand K, Nathan A, et al. Dynamic regulatory elements in single-cell multimodal data implicate key immune cell states enriched for autoimmune disease heritability. Nature genetics. 2023;55(12):2200-2210. doi:10.1038/s41588-023-01577-7

Inferring compound heterozygosity from large-scale exome sequencing data.

Guo MH, Francioli LC, Stenton SL, et al. Inferring compound heterozygosity from large-scale exome sequencing data. Nature genetics. 2023. doi:10.1038/s41588-023-01608-3

A genomic mutational constraint map using variation in 76,156 human genomes.

Chen S, Francioli LC, Goodrich JK, et al. A genomic mutational constraint map using variation in 76,156 human genomes. Nature. 2023. doi:10.1038/s41586-023-06045-0

Dictionary of immune responses to cytokines at single-cell resolution.

Cui A, Huang T, Li S, et al. Dictionary of immune responses to cytokines at single-cell resolution. Nature. 2023. doi:10.1038/s41586-023-06816-9

Slide-tags enables single-nucleus barcoding for multimodal spatial genomics.

Russell AJC, Weir JA, Nadaf NM, et al. Slide-tags enables single-nucleus barcoding for multimodal spatial genomics. Nature. 2023. doi:10.1038/s41586-023-06837-4

Publisher Correction: Spatial atlas of the mouse central nervous system at molecular resolution.

Shi H, He Y, Zhou Y, et al. Publisher Correction: Spatial atlas of the mouse central nervous system at molecular resolution. Nature. 2023. doi:10.1038/s41586-023-06920-w

The molecular cytoarchitecture of the adult mouse brain.

Langlieb J, Sachdev NS, Balderrama KS, et al. The molecular cytoarchitecture of the adult mouse brain. Nature. 2023;624(7991):333-342. doi:10.1038/s41586-023-06818-7

Uncovering the functional diversity of rare CRISPR-Cas systems with deep terascale clustering.

Altae-Tran H, Kannan S, Suberski AJ, et al. Uncovering the functional diversity of rare CRISPR-Cas systems with deep terascale clustering. Science (New York, N.Y.). 2023;382(6673):eadi1910. doi:10.1126/science.adi1910

Epigenome-wide DNA methylation association study of circulating IgE levels identifies novel targets for asthma.

Recto K, Kachroo P, Huan T, et al. Epigenome-wide DNA methylation association study of circulating IgE levels identifies novel targets for asthma. EBioMedicine. 2023;95:104758. doi:10.1016/j.ebiom.2023.104758