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Publications

The carbapenem inoculum effect provides insight into the molecular mechanisms underlying carbapenem resistance in .

Cartagena AJ, Taylor KL, Smith JT, et al. The carbapenem inoculum effect provides insight into the molecular mechanisms underlying carbapenem resistance in . bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.05.23.541813

ancIBD - Screening for identity by descent segments in human ancient DNA.

Ringbauer H, Huang Y, Akbari A, Mallick S, Patterson N, Reich D. ancIBD - Screening for identity by descent segments in human ancient DNA. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.08.531671

Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data.

Wang Y, Sarfraz I, Teh WK, et al. Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.06.531314

Insights into human health from phenome- and genome-wide analyses of UK Biobank retinal optical coherence tomography phenotypes.

Zekavat SM, Jorshery SD, Shweikh Y, et al. Insights into human health from phenome- and genome-wide analyses of UK Biobank retinal optical coherence tomography phenotypes. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.05.16.23290063

Prediction and stratification of longitudinal risk for chronic obstructive pulmonary disease across smoking behaviors.

He Y, Qian DC, Diao JA, et al. Prediction and stratification of longitudinal risk for chronic obstructive pulmonary disease across smoking behaviors. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.04.04.23288086

A molecular glue approach to control the half-life of CRISPR-based technologies.

Sreekanth V, Jan M, Zhao KT, et al. A molecular glue approach to control the half-life of CRISPR-based technologies. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.12.531757

Genomics to Notebook (g2nb): extending the electronic notebook to address the challenges of bioinformatics analysis.

Reich M, Tabor T, Liefeld J, et al. Genomics to Notebook (g2nb): extending the electronic notebook to address the challenges of bioinformatics analysis. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.04.04.535621

DNA methylation-environment interactions in the human genome.

Johnston RA, Aracena KA, Barreiro LB, Lea AJ, Tung J. DNA methylation-environment interactions in the human genome. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.05.19.541437

Photoswitchable Molecular Glues Enable Optical Control of Transcription Factor Degradation.

Arp CJ, Reynders M, Sreekanth V, et al. Photoswitchable Molecular Glues Enable Optical Control of Transcription Factor Degradation. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.04.09.536172

Global diversity of enterococci and description of 18 novel species.

Schwartzman JA, Lebreton F, Salamzade R, et al. Global diversity of enterococci and description of 18 novel species. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.05.18.540996