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Publications

Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants.

McAfee JC, Lee S, Lee J, et al. Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants. Cell genomics. 2023;3(10):100404. doi:10.1016/j.xgen.2023.100404

The functional impact of rare variation across the regulatory cascade.

Li T, Ferraro N, Strober BJ, et al. The functional impact of rare variation across the regulatory cascade. Cell genomics. 2023;3(10):100401. doi:10.1016/j.xgen.2023.100401

Learning functional conservation between human and pig to decipher evolutionary mechanisms underlying gene expression and complex traits.

Li J, Zhao T, Guan D, et al. Learning functional conservation between human and pig to decipher evolutionary mechanisms underlying gene expression and complex traits. Cell genomics. 2023;3(10):100390. doi:10.1016/j.xgen.2023.100390

Equity, diversity, and inclusion at the Global Alliance for Genomics and Health.

Skantharajah N, Baichoo S, Boughtwood TF, et al. Equity, diversity, and inclusion at the Global Alliance for Genomics and Health. Cell genomics. 2023;3(10):100386. doi:10.1016/j.xgen.2023.100386

Multivariate adaptive shrinkage improves cross-population transcriptome prediction and association studies in underrepresented populations.

Araujo DS, Nguyen C, Hu X, et al. Multivariate adaptive shrinkage improves cross-population transcriptome prediction and association studies in underrepresented populations. HGG advances. 2023;4(4):100216. doi:10.1016/j.xhgg.2023.100216

Effects of fir-wood biochar on CH oxidation rates and methanotrophs in landfill cover soils packed at three different proctor compaction levels.

Yi SC, Heijbroek A, Cutz L, et al. Effects of fir-wood biochar on CH oxidation rates and methanotrophs in landfill cover soils packed at three different proctor compaction levels. The Science of the total environment. 2023:167951. doi:10.1016/j.scitotenv.2023.167951

Adversarial and variational autoencoders improve metagenomic binning.

Líndez PP, Johansen J, Kutuzova S, Sigurdsson AI, Nissen JN, Rasmussen S. Adversarial and variational autoencoders improve metagenomic binning. Communications biology. 2023;6(1):1073. doi:10.1038/s42003-023-05452-3

Liquid biopsy epigenomic profiling for cancer subtyping.

Baca SC, Seo JH, Davidsohn MP, et al. Liquid biopsy epigenomic profiling for cancer subtyping. Nature medicine. 2023. doi:10.1038/s41591-023-02605-z

Higher Maternal Body Mass Index is associated with Lower Placental Expression of EPYC: A Genome-Wide Transcriptomic Study.

Sordillo JE, White F, Majid S, et al. Higher Maternal Body Mass Index is associated with Lower Placental Expression of EPYC: A Genome-Wide Transcriptomic Study. The Journal of clinical endocrinology and metabolism. 2023. doi:10.1210/clinem/dgad619

SRCAP mutations drive clonal hematopoiesis through epigenetic and DNA repair dysregulation.

Chen CW, Zhang L, Dutta R, et al. SRCAP mutations drive clonal hematopoiesis through epigenetic and DNA repair dysregulation. Cell stem cell. 2023. doi:10.1016/j.stem.2023.09.011