Publications

Contextualizing protein representations using deep learning on protein networks and single-cell data.

Li MM, Huang Y, Sumathipala M, et al. Contextualizing protein representations using deep learning on protein networks and single-cell data. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.07.18.549602

Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and sequencing.

Zhang A, Jin L, Yao S, et al. Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and sequencing. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.16.532873

Understanding the genetic complexity of puberty timing across the allele frequency spectrum.

Kentistou KA, Kaisinger LR, Stankovic S, et al. Understanding the genetic complexity of puberty timing across the allele frequency spectrum. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.06.14.23291322

Fine-mapping across diverse ancestries drives the discovery of putative causal variants underlying human complex traits and diseases.

Yuan K, Longchamps RJ, Pardiñas AF, et al. Fine-mapping across diverse ancestries drives the discovery of putative causal variants underlying human complex traits and diseases. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.01.07.23284293

Integrative metabolomics differentiate coronary artery disease, peripheral artery disease, and venous thromboembolism risks.

Lee J, Gilliland T, Koyama S, et al. Integrative metabolomics differentiate coronary artery disease, peripheral artery disease, and venous thromboembolism risks. medRxiv : the preprint server for health sciences. 2023. doi:10.1101/2023.06.21.23291103

Aging impairs cold-induced beige adipogenesis and adipocyte metabolic reprogramming.

Holman CD, Sakers AP, Calhoun RP, et al. Aging impairs cold-induced beige adipogenesis and adipocyte metabolic reprogramming. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.20.533514

Multi-omics characterization of partial chemical reprogramming reveals evidence of cell rejuvenation.

Mitchell W, Goeminne LJE, Tyshkovskiy A, et al. Multi-omics characterization of partial chemical reprogramming reveals evidence of cell rejuvenation. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.06.30.546730

A harmonized public resource of deeply sequenced diverse human genomes.

Koenig Z, Yohannes MT, Nkambule LL, et al. A harmonized public resource of deeply sequenced diverse human genomes. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.01.23.525248

Insufficient evidence for natural selection associated with the Black Death.

Barton AR, Santander CG, Skoglund P, Moltke I, Reich D, Mathieson I. Insufficient evidence for natural selection associated with the Black Death. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.03.14.532615

MAPS: Pathologist-level cell type annotation from tissue images through machine learning.

Shaban M, Bai Y, Qiu H, et al. MAPS: Pathologist-level cell type annotation from tissue images through machine learning. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.06.25.546474

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Publications

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