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Publications

Pervasive findings of directional selection realize the promise of ancient DNA to elucidate human adaptation.

Akbari A, Barton AR, Gazal S, et al. Pervasive findings of directional selection realize the promise of ancient DNA to elucidate human adaptation. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.09.14.613021

Genetic Architectures of Medical Images Revealed by Registration of Multiple Modalities.

Friedman SF, Moran GE, Rakic M, Phillipakis A. Genetic Architectures of Medical Images Revealed by Registration of Multiple Modalities. Bioinformatics and biology insights. 2024;18:11779322241282489. doi:10.1177/11779322241282489

Glioblastoma-cortical organoids recapitulate cell state heterogeneity and intercellular transfer.

Mangena V, Chanoch-Myers R, Sartore R, et al. Glioblastoma-cortical organoids recapitulate cell state heterogeneity and intercellular transfer. Cancer discovery. 2024. doi:10.1158/2159-8290.CD-23-1336

In Vivo CRISPR Screening Reveals CHD7 as a Positive Regulator of Short-lived Effector Cells.

LaFleur MW, D’Andrea JM, Patterson DG, et al. In Vivo CRISPR Screening Reveals CHD7 as a Positive Regulator of Short-lived Effector Cells. Journal of immunology (Baltimore, Md. : 1950). 2024. doi:10.4049/jimmunol.2400213

Stress molecular signaling in interaction with cognition.

Lugenbühl JF, Viho EMG, Binder EB, Daskalakis NP. Stress molecular signaling in interaction with cognition. Biological psychiatry. 2024. doi:10.1016/j.biopsych.2024.09.023

To boldly go where no microRNAs have gone before: spaceflight impact on risk for small-for-gestational-age infants.

Corti G, Kim J, Enguita FJ, et al. To boldly go where no microRNAs have gone before: spaceflight impact on risk for small-for-gestational-age infants. Communications biology. 2024;7(1):1268. doi:10.1038/s42003-024-06944-6

C-ziptf: stable tensor factorization for zero-inflated multi-dimensional genomics data.

Chafamo D, Shanmugam V, Tokcan N. C-ziptf: stable tensor factorization for zero-inflated multi-dimensional genomics data. BMC bioinformatics. 2024;25(1):323. doi:10.1186/s12859-024-05886-4

Spatial oncology: Translating contextual biology to the clinic.

Gong D, Arbesfeld-Qiu JM, Perrault E, Bae JW, Hwang WL. Spatial oncology: Translating contextual biology to the clinic. Cancer cell. 2024. doi:10.1016/j.ccell.2024.09.001

Sex-specific response of the human plasma lipidome to short-term cold exposure.

Höring M, Brunner S, Scheiber J, et al. Sex-specific response of the human plasma lipidome to short-term cold exposure. Biochimica et biophysica acta. Molecular and cell biology of lipids. 2024:159567. doi:10.1016/j.bbalip.2024.159567

Forecasting the effects of smoking prevalence scenarios on years of life lost and life expectancy from 2022 to 2050: a systematic analysis for the Global Burden of Disease Study 2021.

Forecasting the effects of smoking prevalence scenarios on years of life lost and life expectancy from 2022 to 2050: a systematic analysis for the Global Burden of Disease Study 2021. The Lancet. Public health. 2024;9(10):e729-e744. doi:10.1016/S2468-2667(24)00166-X