Publications

Serial multiomics uncovers anti-glioblastoma responses not evident by routine clinical analyses.

Ling AL, Gantchev J, Prabhu MC, et al. Serial multiomics uncovers anti-glioblastoma responses not evident by routine clinical analyses. Science translational medicine. 2025;17(819):eadv2881. doi:10.1126/scitranslmed.adv2881

Clonal memory of colitis accumulates and promotes tumor growth.

Nagaraja S, Ojeda-Miron L, Zhang R, et al. Clonal memory of colitis accumulates and promotes tumor growth. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.02.13.638099

A cellular and spatial atlas of TP53-associated tissue remodeling defines a multicellular tumor ecosystem in lung adenocarcinoma.

Zhao W, Nguyen TT, Bhagwat A, et al. A cellular and spatial atlas of TP53-associated tissue remodeling defines a multicellular tumor ecosystem in lung adenocarcinoma. Nature cancer. 2025. doi:10.1038/s43018-025-01053-7

Biologically grounded neocortex computational primitives implemented on neuromorphic hardware improve vision transformer performance.

Iqbal A, Mahmood H, Stuart GJ, Fishell G, Honnuraiah S. Biologically grounded neocortex computational primitives implemented on neuromorphic hardware improve vision transformer performance. Proceedings of the National Academy of Sciences of the United States of America. 2025;122(41):e2504164122. doi:10.1073/pnas.2504164122

Acquired Amphotericin B Resistance Attributed to a Mutated in .

Massic L, Doorley LA, Jones SJ, et al. Acquired Amphotericin B Resistance Attributed to a Mutated in . bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.03.30.646105

Circulating Cardiovascular Proteomic Associations With Genetics and Disease.

McGurk KA, Curran L, Sau A, et al. Circulating Cardiovascular Proteomic Associations With Genetics and Disease. Circulation. Genomic and precision medicine. 2025:e005005. doi:10.1161/CIRCGEN.124.005005

New Genetic Loci Implicated in Cardiac Morphology and Function Using Three-Dimensional Population Phenotyping.

Lu C, McGurk KA, Zheng SL, et al. New Genetic Loci Implicated in Cardiac Morphology and Function Using Three-Dimensional Population Phenotyping. Circulation. Genomic and precision medicine. 2025:e005116. doi:10.1161/CIRCGEN.124.005116

Improved allele frequencies in gnomAD through local ancestry inference.

Kore P, Wilson MW, Tiao G, et al. Improved allele frequencies in gnomAD through local ancestry inference. Nature communications. 2025;16(1):8734. doi:10.1038/s41467-025-63340-2

Mondo: Integrating Disease Terminology Across Communities.

Vasilevsky NA, Toro S, Matentzoglu N, et al. Mondo: Integrating Disease Terminology Across Communities. Genetics. 2025. doi:10.1093/genetics/iyaf215

An AI Agent for cell-type specific brain computer interfaces.

Marin-Llobet A, Lin Z, Baek J, et al. An AI Agent for cell-type specific brain computer interfaces. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.09.11.675660

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Publications

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