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Publications

From parasite to partner: unravelling the multifaceted role of Blastocystis in human health and disease.

Deng L, Tan KSW. From parasite to partner: unravelling the multifaceted role of Blastocystis in human health and disease. The Lancet. Microbe. 2025;6(9):101155. doi:10.1016/j.lanmic.2025.101155

Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases.

Alsentzer E, Li MM, Kobren SN, et al. Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases. NPJ digital medicine. 2025;8(1):380. doi:10.1038/s41746-025-01749-1

Author Correction: Regulatory genomic circuitry of human disease loci by integrative epigenomics.

Boix CA, James BT, Park YP, Meuleman W, Kellis M. Author Correction: Regulatory genomic circuitry of human disease loci by integrative epigenomics. Nature. 2025;643(8071):E11. doi:10.1038/s41586-025-09134-4

Common and rare variant analyses implicate late-infancy cerebellar development and immune genes in ADHD.

Zhong Y, Baum LW, Tubbs JD, et al. Common and rare variant analyses implicate late-infancy cerebellar development and immune genes in ADHD. Journal of neurodevelopmental disorders. 2025;17(1):34. doi:10.1186/s11689-025-09626-4

Engrafting gut bacteriophages have potential to modulate microbial metabolism in fecal microbiota transplantation.

Ji S, Ahmad F, Peng B, et al. Engrafting gut bacteriophages have potential to modulate microbial metabolism in fecal microbiota transplantation. Microbiome. 2025;13(1):149. doi:10.1186/s40168-025-02046-5

Results of the Protein Engineering Tournament: An Open Science Benchmark for Protein Modeling and Design.

Armer C, Kane H, Cortade DL, et al. Results of the Protein Engineering Tournament: An Open Science Benchmark for Protein Modeling and Design. Proteins. 2025. doi:10.1002/prot.70008

The World Needs a PEPP Policy that Addresses Biosafety Loopholes Highlighted by the COVID-19 Pandemic.

Chan A. The World Needs a PEPP Policy that Addresses Biosafety Loopholes Highlighted by the COVID-19 Pandemic. Applied biosafety : journal of the American Biological Safety Association. 2025;30(2):146-150. doi:10.1089/apb.2024.0041

Resident memory T cell development is gradual and shows AP-1 gene expression in mature cells.

Smith NP, Yan Y, Pan Y, et al. Resident memory T cell development is gradual and shows AP-1 gene expression in mature cells. JCI insight. 2025;10(12). doi:10.1172/jci.insight.187381

Characterizing PET CT patterns and bacterial dissemination features of tuberculosis relapse in the macaque model.

Maiello P, Diedrich C, Rutledge T, et al. Characterizing PET CT patterns and bacterial dissemination features of tuberculosis relapse in the macaque model. Infection and immunity. 2025;93(8):e0017725. doi:10.1128/iai.00177-25

PINK1/Parkin Deficiency Enhances Vascular Remodeling and Aggravates Hypoxia-induced Pulmonary Hypertension.

Rehman R, Dieffenbach P, Vellarikkal SK, et al. PINK1/Parkin Deficiency Enhances Vascular Remodeling and Aggravates Hypoxia-induced Pulmonary Hypertension. American journal of respiratory cell and molecular biology. 2025. doi:10.1165/rcmb.2024-0349OC