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Publications

Gasdermin D deletion prevents liver injury and exacerbates extrahepatic damage in a murine model of alcohol-induced ACLF.

Ortega-Ribera M, Zhuang Y, Brezani V, et al. Gasdermin D deletion prevents liver injury and exacerbates extrahepatic damage in a murine model of alcohol-induced ACLF. eGastroenterology. 2025;3(1):e100151. doi:10.1136/egastro-2024-100151

Nucleotide level mapping of uracils in murine heavy chain switch regions shows correlation between uracilation and positions of switch junctions created during class-switch recombination.

Mohamad-Ramshan R, Sakhtemani R, Butt Y, Lawrence MS, Bhagwat AS. Nucleotide level mapping of uracils in murine heavy chain switch regions shows correlation between uracilation and positions of switch junctions created during class-switch recombination. NAR molecular medicine. 2025;2(1):ugaf003. doi:10.1093/narmme/ugaf003

Label-Free 3D Cell Imaging Using Hydrogels Functionalized with Switchable Iridium Complexes.

Fiorini F, Longhi E, Lazaro A, et al. Label-Free 3D Cell Imaging Using Hydrogels Functionalized with Switchable Iridium Complexes. Chemistry (Weinheim an der Bergstrasse, Germany). 2025:e202404572. doi:10.1002/chem.202404572

Identification of Hub Genes Involved in Early-onset Schizophrenia: From Genetic Susceptibility to Predicted Regulated Gene Expression.

Jen Y, Yu SL, Hsiao PC, et al. Identification of Hub Genes Involved in Early-onset Schizophrenia: From Genetic Susceptibility to Predicted Regulated Gene Expression. Research square. 2025. doi:10.21203/rs.3.rs-5833160/v1

Somatic Genomic and Transcriptomic Changes in Single Ischemic Human Heart Cardiomyocytes.

Hilal N, An Z, Prondzynski M, et al. Somatic Genomic and Transcriptomic Changes in Single Ischemic Human Heart Cardiomyocytes. Research square. 2025. doi:10.21203/rs.3.rs-5875531/v1

N-terminal modification of Histone H3 inhibits H3K27M-mediated loss of H3K27 trimethylation.

Poux N, Zhang DF, Kebede AF, et al. N-terminal modification of Histone H3 inhibits H3K27M-mediated loss of H3K27 trimethylation. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.01.24.634760

Clinico-genomic features predict distinct metastatic phenotypes in cutaneous melanoma.

Aprati TJ, Day CP, Lee D, et al. Clinico-genomic features predict distinct metastatic phenotypes in cutaneous melanoma. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.01.24.633441

Refining the cis-regulatory grammar learned by sequence-to-activity models by increasing model resolution.

Chandra NA, Hu Y, Buenrostro JD, Mostafavi S, Sasse A. Refining the cis-regulatory grammar learned by sequence-to-activity models by increasing model resolution. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.01.24.634804

Discovery of Chirally-dependent Protein -2-Hydroxyglutarylation by D2HG and L2HG.

Zhang Z, Liu YK, Luo Z, et al. Discovery of Chirally-dependent Protein -2-Hydroxyglutarylation by D2HG and L2HG. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.01.24.634716

OPPORTUNISTIC ASSESSMENT OF CARDIOVASCULAR RISK USING AI-DERIVED STRUCTURAL AORTIC AND CARDIAC PHENOTYPES FROM NON-CONTRAST CHEST COMPUTED TOMOGRAPHY.

Oo DW, Sturniolo A, Jung M, et al. OPPORTUNISTIC ASSESSMENT OF CARDIOVASCULAR RISK USING AI-DERIVED STRUCTURAL AORTIC AND CARDIAC PHENOTYPES FROM NON-CONTRAST CHEST COMPUTED TOMOGRAPHY. medRxiv : the preprint server for health sciences. 2025. doi:10.1101/2025.01.28.25321302