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Publications

Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL.

Guillaumet-Adkins A, Sotudeh N, Potdar S, et al. Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.27.702019

PMCID

PMC12873972

SCANBIT facilitates identification of tumor cell populations in scRNAseq data using pseudobulked SNV calls.

Mv C, Mj G, Ac G, et al. SCANBIT facilitates identification of tumor cell populations in scRNAseq data using pseudobulked SNV calls. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.27.701834

PMCID

PMC12873960

Activating Ras-MAPK pathway variants drive hippocampal clonal competition in human epilepsy.

Khoshkhoo S, Bae M, Wang Y, et al. Activating Ras-MAPK pathway variants drive hippocampal clonal competition in human epilepsy. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.26.701822

PMCID

PMC12873922

TRACE: Open-Source Software for Quantifying Somatic Variation of Tandem Repeats by Capillary Electrophoresis.

Jiang A, Correia K, Gillis T, et al. TRACE: Open-Source Software for Quantifying Somatic Variation of Tandem Repeats by Capillary Electrophoresis. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.22.701167

PMCID

PMC12871719

A resource of "bottom-line" variant associations for 1,281 complex traits by integrating data across published genome-wide association studies.

Nguyen T, Büyükgöl F, Smadbeck P, et al. A resource of "bottom-line" variant associations for 1,281 complex traits by integrating data across published genome-wide association studies. Research square. 2026. doi:10.21203/rs.3.rs-8585052/v1

PMCID

PMC12869677

Prognostic value of tumor-informed ctDNA in HPV-independent head and neck squamous cell carcinoma.

Ruiz-Torres DA, Roberts TJ, Du P, et al. Prognostic value of tumor-informed ctDNA in HPV-independent head and neck squamous cell carcinoma. medRxiv : the preprint server for health sciences. 2026. doi:10.64898/2026.01.09.26343802

PMCID

PMC12870559

Multi-molecular scores map process-specific polygenic diabetes risk to atherosclerosis, cardiometabolic diseases, and vascular complications.

Li H, Morze J, Adiels M, et al. Multi-molecular scores map process-specific polygenic diabetes risk to atherosclerosis, cardiometabolic diseases, and vascular complications. medRxiv : the preprint server for health sciences. 2026. doi:10.64898/2026.01.15.26344187

PMCID

PMC12870590

Machine learning enables efficient and effective affinity maturation of nanobodies.

Paul S, Harvey EP, Osei-Owusu J, et al. Machine learning enables efficient and effective affinity maturation of nanobodies. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.11.698911

PMCID

PMC12871374

Latent Causal Diffusions for Single-Cell Perturbation Modeling.

Lorch L, Zhang J, Bunne C, Krause A, Schölkopf B, Uhler C. Latent Causal Diffusions for Single-Cell Perturbation Modeling. ArXiv. 2026.

PMCID

PMC12869406

Medea: An omics AI agent for therapeutic discovery.

Sui P, Li MM, Gao S, et al. Medea: An omics AI agent for therapeutic discovery. bioRxiv : the preprint server for biology. 2026. doi:10.64898/2026.01.16.696667

PMCID

PMC12871667