Tromans-Coia C, Jamali N, Abbasi HS, et al. Assessing the performance of the Cell Painting assay across different imaging systems. Cytometry. Part A : the journal of the International Society for Analytical Cytology. 2023. doi:10.1002/cyto.a.24786
Imaging Platform
Haghighi M, Caicedo JC, Cimini BA, Carpenter AE, Singh S. High-dimensional gene expression and morphology profiles of cells across 28,000 genetic and chemical perturbations. Nat Methods. 2022. doi:10.1038/s41592-022-01667-0
Rohban MH, Fuller AM, Tan C, et al. Virtual screening for small-molecule pathway regulators by image-profile matching. Cell Syst. 2022. doi:10.1016/j.cels.2022.08.003
Filby A, Carpenter AE. A New Image for Cell Sorting. N Engl J Med. 2022;386(18):1755-1758. doi:10.1056/NEJMcibr2200971
Chow YL, Singh S, Carpenter AE, Way GP. Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic. PLoS Comput Biol. 2022;18(2):e1009888. doi:10.1371/journal.pcbi.1009888
Bagheri N, Carpenter AE, Lundberg E, Plant AL, Horwitz R. The new era of quantitative cell imaging-challenges and opportunities. Mol Cell. 2022;82(2):241-247. doi:10.1016/j.molcel.2021.12.024
Lemmel S, Weckmann M, Wohlers A, et al. In vitro neutrophil migration is associated with inhaled corticosteroid treatment and serum cytokines in pediatric asthma. Front Pharmacol. 2022;13:1021317. doi:10.3389/fphar.2022.1021317
Rees P, Summers HD, Filby A, Carpenter AE, Doan M. Imaging flow cytometry. Nature Reviews Methods Primers. 2022.
Lemmel S, weckmann M, Wohlers A, Jirmo A, Carpenter AE. In vitro neutrophil migration is associated with inhaled corticosteroid treatment and serum cytokines in pediatric asthma. Front. Pharmacol. 2022.
Rueden CT, Hiner MC, Evans EL, et al. PyImageJ: A library for integrating ImageJ and Python. Nature methods. 2022;19(11):1326-1327. doi:10.1038/s41592-022-01655-4