Lemmel S, weckmann M, Wohlers A, Jirmo A, Carpenter AE. In vitro neutrophil migration is associated with inhaled corticosteroid treatment and serum cytokines in pediatric asthma. Front. Pharmacol. 2022.
Imaging Platform
Lemmel S, Weckmann M, Wohlers A, et al. In vitro neutrophil migration is associated with inhaled corticosteroid treatment and serum cytokines in pediatric asthma. Front Pharmacol. 2022;13:1021317. doi:10.3389/fphar.2022.1021317
Way G, Natoli T, Adeboye A, et al. Morphology and gene expression profiling provide complementary information for mapping cell state. Cell systems. 2022;13(11):911-923.e9. doi:10.1016/j.cels.2022.10.001
Rueden CT, Hiner MC, Evans EL, et al. PyImageJ: A library for integrating ImageJ and Python. Nature methods. 2022;19(11):1326-1327. doi:10.1038/s41592-022-01655-4
Rees P, Summers HD, Filby A, Carpenter AE, Doan M. Imaging flow cytometry. Nature Reviews Methods Primers. 2022.
Boivin B, Roet KCD, Huang X, et al. A Multiparametric Activity Profiling Platform for Neuron Disease Phenotyping and Drug Screening. Mol Biol Cell. 2021:mbcE21100481. doi:10.1091/mbc.E21-10-0481
Way GP, Greene CS, Carninci P, et al. A field guide to cultivating computational biology. PLoS Biol. 2021;19(10):e3001419. doi:10.1371/journal.pbio.3001419
Stirling DR, Swain-Bowden MJ, Lucas AM, Carpenter AE, Cimini BA, Goodman A. CellProfiler 4: improvements in speed, utility and usability. BMC Bioinformatics. 2021;22(1):433. doi:10.1186/s12859-021-04344-9
Stirling DR, Carpenter AE, Cimini BA. CellProfiler Analyst 3.0: Accessible data exploration and machine learning for image analysis. Bioinformatics. 2021. doi:10.1093/bioinformatics/btab634
Wills JW, Verma JR, Rees BJ, et al. Inter-laboratory automation of the in vitro micronucleus assay using imaging flow cytometry and deep learning. Arch Toxicol. 2021;95(9):3101-3115. doi:10.1007/s00204-021-03113-0