Laber S, Strobel S, Mercader JM, et al. Discovering cellular programs of intrinsic and extrinsic drivers of metabolic traits using LipocyteProfiler. Cell genomics. 2023;3(7):100346. doi:10.1016/j.xgen.2023.100346
Imaging Platform
Yu S, Kalinin AA, Paraskevopoulou MD, et al. Integrating inflammatory biomarker analysis and artificial intelligence-enabled image-based profiling to identify drug targets for intestinal fibrosis. Cell chemical biology. 2023. doi:10.1016/j.chembiol.2023.06.014
Carpenter AE, Cimini BA, Eliceiri KW. Smart microscopes of the future. Nature methods. 2023;20(7):962-964. doi:10.1038/s41592-023-01912-0
Cimini BA, Eliceiri KW. The Twenty Questions of bioimage object analysis. Nature methods. 2023;20(7):976-978. doi:10.1038/s41592-023-01919-7
Haghighi M, Caicedo JC, Cimini BA, Carpenter AE, Singh S. High-dimensional gene expression and morphology profiles of cells across 28,000 genetic and chemical perturbations. Nat Methods. 2022. doi:10.1038/s41592-022-01667-0
Rohban MH, Fuller AM, Tan C, et al. Virtual screening for small-molecule pathway regulators by image-profile matching. Cell Syst. 2022. doi:10.1016/j.cels.2022.08.003
Filby A, Carpenter AE. A New Image for Cell Sorting. N Engl J Med. 2022;386(18):1755-1758. doi:10.1056/NEJMcibr2200971
Chow YL, Singh S, Carpenter AE, Way GP. Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic. PLoS Comput Biol. 2022;18(2):e1009888. doi:10.1371/journal.pcbi.1009888
Bagheri N, Carpenter AE, Lundberg E, Plant AL, Horwitz R. The new era of quantitative cell imaging-challenges and opportunities. Mol Cell. 2022;82(2):241-247. doi:10.1016/j.molcel.2021.12.024
Jamali N, Dobson ET, Eliceiri KW, Carpenter AE, Cimini BA. 2020 BioImage Analysis Survey: Community experiences and needs for the future. Biol Imaging. 2022;1. doi:10.1017/S2633903X21000039