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Publications

Evolution of the crustal phosphorus reservoir.

Walton CR, Hao J, Huang F, et al. Evolution of the crustal phosphorus reservoir. Science advances. 2023;9(18):eade6923. doi:10.1126/sciadv.ade6923

Genetic events associated with venetoclax resistance in CLL identified by whole exome sequencing of patient samples.

Khalsa JK, Cha J, Utro F, et al. Genetic events associated with venetoclax resistance in CLL identified by whole exome sequencing of patient samples. Blood. 2023. doi:10.1182/blood.2022016600

Single-cell analysis reveals inflammatory interactions driving macular degeneration.

Kuchroo M, DiStasio M, Song E, et al. Single-cell analysis reveals inflammatory interactions driving macular degeneration. Nature communications. 2023;14(1):2589. doi:10.1038/s41467-023-37025-7

The power of TOPMed imputation for the discovery of Latino-enriched rare variants associated with type 2 diabetes.

Huerta-Chagoya A, Schroeder P, Mandla R, et al. The power of TOPMed imputation for the discovery of Latino-enriched rare variants associated with type 2 diabetes. Diabetologia. 2023. doi:10.1007/s00125-023-05912-9

Relationship of HPV16 E6 seropositivity with circulating tumor tissue modified HPV16 DNA before head and neck cancer diagnosis.

Rettig EM, Waterboer T, Sim E, et al. Relationship of HPV16 E6 seropositivity with circulating tumor tissue modified HPV16 DNA before head and neck cancer diagnosis. Oral oncology. 2023;141:106417. doi:10.1016/j.oraloncology.2023.106417

Structural and biochemical characterization establishes a detailed understanding of KEAP1-CUL3 complex assembly.

Adamson RJ, Payne C, Bartual SG, Mazitschek R, Bullock AN. Structural and biochemical characterization establishes a detailed understanding of KEAP1-CUL3 complex assembly. Free radical biology & medicine. 2023. doi:10.1016/j.freeradbiomed.2023.04.021

A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories.

Placido D, Yuan B, Hjaltelin JX, et al. A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories. Nature medicine. 2023. doi:10.1038/s41591-023-02332-5

Catch me if you can: capturing microbial community transformation by extracellular DNA using Hi-C sequencing.

Calderón-Franco D, van Loosdrecht MCM, Abeel T, Weissbrodt DG. Catch me if you can: capturing microbial community transformation by extracellular DNA using Hi-C sequencing. Antonie van Leeuwenhoek. 2023. doi:10.1007/s10482-023-01834-z

Region Capture Micro-C reveals coalescence of enhancers and promoters into nested microcompartments.

Goel VY, Huseyin MK, Hansen AS. Region Capture Micro-C reveals coalescence of enhancers and promoters into nested microcompartments. Nature genetics. 2023. doi:10.1038/s41588-023-01391-1

Single-cell RNA sequencing of liver fine-needle aspirates captures immune diversity in the blood and liver in chronic hepatitis B patients.

Genshaft AS, Subudhi S, Keo A, et al. Single-cell RNA sequencing of liver fine-needle aspirates captures immune diversity in the blood and liver in chronic hepatitis B patients. Hepatology (Baltimore, Md.). 2023. doi:10.1097/HEP.0000000000000438